G1626307


Basic Information

Item Value
gene id G1626307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42680082 ~ 42680822 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1860989
tgtaactttctcactcatcattggtcacgattcattcaggagtacagagccaaagtacagaaccaaaacaaaaacatttgtcactgttccaatacttttggagcgCACTGTATAATGCACCAGGTCCAGTATGATCAAGTCAGACACATGAAATTGGCCATTCAAAGAGAAAACCCATCCTCTACAGCAGTCTATCAGAGGAGTGGGGTCATTTATGAGTCTGAAATGTGTTGCAGGTGGTGAAGccagggaggggtgagggaggtggagagCTACTAACCGTCGGGCTGGCTACAGTTCAGAGAAAACCCCCAAAATGAACATCCTTCTTTCTAAATATCACCCTGACATTCTTTCCACTGTTTCATAAAAATACCCCAGAAGAAAAAGCATGTTTATAGGTTGTCCAAGTCAGAGAACCTTCTGGAGCTCTTCCAAAGCCTTGAAGTGTGTGATTTACTCAACAGTGCTTAATGTCTATGACACACATTGTTTTATACTTAATTTTTCAACAGAATCCACCCCCTCCCGCAAGTAACTGCCATATTGTTTCATTTACAACCTGAGATCCCTCAGGCTAGTATCCCCATGTAGCCTTAAGGTGAGTGTATCTACactttacagtgcatttggacaCTAATTGAGAACCCTTTactttttctaaaaaaaaatacgttacagccttattctaatatgtattaaataaataaaaaatcctccacattctacacacaatacccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1860989 True 741 lncRNA 0.40 1 42680082 42680822

Neighbor

gene id symbol gene type direction distance location
erg28 LOC106591002 coding downstream 9001 42669036 ~ 42671081 (-)
LOC110497915 LOC106591465 coding downstream 75318 42601758 ~ 42604764 (-)
LOC110497913 NA coding downstream 108625 42570828 ~ 42571457 (-)
eml5 LOC106591625 coding downstream 118113 42494458 ~ 42561969 (-)
npc2 npc2 coding downstream 188020 42489857 ~ 42492062 (-)
tgfb3 LOC106590795 coding upstream 84055 42764877 ~ 42786064 (-)
LOC110498358 LOC106590063 coding upstream 419403 43100225 ~ 43110498 (-)
LOC110497926 LOC106589845 coding upstream 444612 43125434 ~ 43135492 (-)
LOC110498359 LOC106599825 coding upstream 455378 43136200 ~ 43139430 (-)
LOC110497927 lrrc74a coding upstream 460700 43141522 ~ 43148464 (-)
G1626306 NA non-coding downstream 51 42679809 ~ 42680031 (-)
G1626303 NA non-coding downstream 3111 42676407 ~ 42676971 (-)
G1626300 NA non-coding downstream 7798 42671510 ~ 42672284 (-)
G1626299 NA non-coding downstream 14861 42664867 ~ 42665221 (-)
G1626308 NA non-coding upstream 44 42680866 ~ 42681213 (-)
G1626309 NA non-coding upstream 484 42681306 ~ 42681670 (-)
G1626310 NA non-coding upstream 3008 42683830 ~ 42684078 (-)
G1626312 NA non-coding upstream 6597 42687419 ~ 42687685 (-)
G1626316 NA non-coding upstream 10560 42691382 ~ 42691610 (-)
G1626232 LOC106611303 other downstream 38809 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 209380 42465705 ~ 42480874 (-)
G1626105 NA other downstream 424285 42255235 ~ 42255797 (-)
G1625428 arf6 other downstream 829649 41846255 ~ 41850433 (-)
G1625066 NA other downstream 1485323 41194433 ~ 41194759 (-)
G1626324 NA other upstream 78472 42759294 ~ 42838434 (-)
G1627068 NA other upstream 727905 43408727 ~ 43409109 (-)
LOC110498001 NA other upstream 3322943 46003765 ~ 46008718 (-)
G1631005 NA other upstream 3938385 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 4149512 46830334 ~ 46830650 (-)

Expression


Co-expression Network