G1626440


Basic Information

Item Value
gene id G1626440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42863353 ~ 42863580 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861132
GGGTAGAGGAGTGCTGGACGGATAAGATCCCACTGGTCCGAGAGCAATGAGAGGCTTGTGATGAGAACATGTCTGAAGGGTAATGTTCTAAACATTATGCATATACCTAAACATCACTTTCATTTTATTTGTGTGTGAGAAAATATCTATTTGGGCAAAACAATCATTTAACATCCTATAGGATAGAATATTTTAGGATACTGAAATAGTCTTACTTTTTACATGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861132 True 228 lncRNA 0.36 1 42863353 42863580

Neighbor

gene id symbol gene type direction distance location
LOC110497923 LOC106590872 coding upstream 51875 42790955 ~ 42811478 (+)
ttll5 ttll5 coding upstream 97603 42671240 ~ 42765750 (+)
LOC110497918 LOC106591116 coding upstream 196628 42636445 ~ 42666725 (+)
LOC110497917 atf3 coding upstream 235253 42620570 ~ 42628100 (+)
LOC110497916 LOC106591288 coding upstream 243857 42610081 ~ 42619496 (+)
LOC110497924 esrrb coding downstream 118665 42982245 ~ 43039659 (+)
LOC110497925 LOC106590001 coding downstream 248122 43111702 ~ 43125556 (+)
LOC110498360 LOC106589621 coding downstream 311198 43174778 ~ 43210365 (+)
LOC110497931 LOC106589425 coding downstream 415693 43279273 ~ 43440028 (+)
LOC110498578 LOC106589566 coding downstream 579753 43443333 ~ 43445749 (+)
G1626434 NA non-coding upstream 3449 42859686 ~ 42859904 (+)
G1626430 NA non-coding upstream 7795 42855339 ~ 42855558 (+)
G1626423 NA non-coding upstream 12193 42850886 ~ 42851160 (+)
G1625943 NA non-coding upstream 164499 42698630 ~ 42698854 (+)
LOC110498356 NA non-coding downstream 12006 42862652 ~ 42877342 (+)
G1626464 NA non-coding downstream 16671 42880251 ~ 42881091 (+)
G1626484 NA non-coding downstream 31994 42895574 ~ 42895786 (+)
G1626500 NA non-coding downstream 46990 42910570 ~ 42910953 (+)
G1626504 NA non-coding downstream 48091 42911671 ~ 42911977 (+)
G1625710 NA other upstream 611782 42250731 ~ 42251571 (+)
G1624524 NA other upstream 826235 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 827409 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 833847 41988770 ~ 42029506 (+)
G1624560 NA other upstream 853023 42009961 ~ 42010330 (+)
G1627319 NA other downstream 951146 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 1550742 44414322 ~ 44448672 (+)
G1628486 NA other downstream 1819782 44683362 ~ 44748925 (+)
G1628488 NA other downstream 1824802 44688382 ~ 44747446 (+)

Expression


Co-expression Network