G1626464


Basic Information

Item Value
gene id G1626464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42880251 ~ 42881091 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861156
ctattgtagctggaaacggcagattttttatggaatatctacatatgcgtacagaggcccattatcagcaaccatcacttctgtgttccaatggcacgttgtgttagctaatccaagtttataattttaaaaggctaattgatcattagaaaatccttttgcaattatgttgcacagctgaaaactgtcgttctgattaaagaagcaataaaactgtccttctttagagtagttgagtatctggagcatcagcatttgtgggttcgattacaggctcaaaatggccagaaacaaagatctttcttctgaaactcaccagtctattcttgttctgagaaatgaaggatattccatgtgagaaattggcaagaaactgaagatcttgtacaatgctgtgtactacttccttcacagaacagcacaaactgtctctaaccagaatagaaaggggaCTGAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861156 True 458 lncRNA 0.38 2 42880251 42881091

Neighbor

gene id symbol gene type direction distance location
LOC110498356 NA coding upstream 2909 42862652 ~ 42877342 (+)
LOC110497923 LOC106590872 coding upstream 68773 42790955 ~ 42811478 (+)
ttll5 ttll5 coding upstream 114501 42671240 ~ 42765750 (+)
LOC110497918 LOC106591116 coding upstream 213526 42636445 ~ 42666725 (+)
LOC110497917 atf3 coding upstream 252151 42620570 ~ 42628100 (+)
LOC110497924 esrrb coding downstream 101154 42982245 ~ 43039659 (+)
LOC110497925 LOC106590001 coding downstream 230611 43111702 ~ 43125556 (+)
LOC110498360 LOC106589621 coding downstream 293687 43174778 ~ 43210365 (+)
LOC110497931 LOC106589425 coding downstream 398182 43279273 ~ 43440028 (+)
LOC110498578 LOC106589566 coding downstream 562242 43443333 ~ 43445749 (+)
G1626440 NA non-coding upstream 16671 42863353 ~ 42863580 (+)
G1626434 NA non-coding upstream 20347 42859686 ~ 42859904 (+)
G1626430 NA non-coding upstream 24693 42855339 ~ 42855558 (+)
G1626423 NA non-coding upstream 29091 42850886 ~ 42851160 (+)
G1626484 NA non-coding downstream 14483 42895574 ~ 42895786 (+)
G1626500 NA non-coding downstream 29479 42910570 ~ 42910953 (+)
G1626504 NA non-coding downstream 30580 42911671 ~ 42911977 (+)
G1626511 NA non-coding downstream 36895 42917986 ~ 42918218 (+)
G1626527 NA non-coding downstream 55211 42936302 ~ 42936556 (+)
G1625710 NA other upstream 628680 42250731 ~ 42251571 (+)
G1624524 NA other upstream 843133 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 844307 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 850745 41988770 ~ 42029506 (+)
G1624560 NA other upstream 869921 42009961 ~ 42010330 (+)
G1627319 NA other downstream 933635 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 1533231 44414322 ~ 44448672 (+)
G1628486 NA other downstream 1802271 44683362 ~ 44748925 (+)
G1628488 NA other downstream 1807291 44688382 ~ 44747446 (+)

Expression


Co-expression Network