G1626527


Basic Information

Item Value
gene id G1626527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42936302 ~ 42936556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861219
cgtgtccgatttcaaaaacgctttacagctaaagcacaacatatgattatattagatcaccgccaagtcgaaaaaacacacagccatttttccagccaaagataggagtcacaaaaagcagaaatatagataaaatgaatcactaacctttgatgatcttcatcagatgacactcataggacatcatgttacacaatacatgtatgttttgttcgataatgtgcatatttatataaaaaaatctcagtttacatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861219 True 255 lncRNA 0.33 1 42936302 42936556

Neighbor

gene id symbol gene type direction distance location
LOC110498356 NA coding upstream 58960 42862652 ~ 42877342 (+)
LOC110497923 LOC106590872 coding upstream 124824 42790955 ~ 42811478 (+)
ttll5 ttll5 coding upstream 170552 42671240 ~ 42765750 (+)
LOC110497918 LOC106591116 coding upstream 269577 42636445 ~ 42666725 (+)
LOC110497917 atf3 coding upstream 308202 42620570 ~ 42628100 (+)
LOC110497924 esrrb coding downstream 45689 42982245 ~ 43039659 (+)
LOC110497925 LOC106590001 coding downstream 175146 43111702 ~ 43125556 (+)
LOC110498360 LOC106589621 coding downstream 238222 43174778 ~ 43210365 (+)
LOC110497931 LOC106589425 coding downstream 342717 43279273 ~ 43440028 (+)
LOC110498578 LOC106589566 coding downstream 506777 43443333 ~ 43445749 (+)
G1626511 NA non-coding upstream 18084 42917986 ~ 42918218 (+)
G1626504 NA non-coding upstream 24325 42911671 ~ 42911977 (+)
G1626500 NA non-coding upstream 25349 42910570 ~ 42910953 (+)
G1626484 NA non-coding upstream 40516 42895574 ~ 42895786 (+)
G1626464 NA non-coding upstream 55211 42880251 ~ 42881091 (+)
G1626538 NA non-coding downstream 10508 42947064 ~ 42947279 (+)
G1626539 NA non-coding downstream 12554 42949110 ~ 42949389 (+)
G1626559 NA non-coding downstream 28544 42965100 ~ 42965315 (+)
G1626561 NA non-coding downstream 29226 42965782 ~ 42966016 (+)
G1626593 NA non-coding downstream 71229 43007785 ~ 43007994 (+)
G1625710 NA other upstream 684731 42250731 ~ 42251571 (+)
G1624524 NA other upstream 899184 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 900358 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 906796 41988770 ~ 42029506 (+)
G1624560 NA other upstream 925972 42009961 ~ 42010330 (+)
G1627319 NA other downstream 878170 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 1477766 44414322 ~ 44448672 (+)
G1628486 NA other downstream 1746806 44683362 ~ 44748925 (+)
G1628488 NA other downstream 1751826 44688382 ~ 44747446 (+)

Expression


Co-expression Network