G1626608


Basic Information

Item Value
gene id G1626608
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43032597 ~ 43032808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861300
tgtctgttagtgtgagtgtgtatgcatGCCTGCGTGTAGCATGCatgagtgtgttgtgtgtgtgtttttatcaaCTCACCCAGCGTGGTACTGAGTGTGTGTCACGTCCTCGACCCCTCCAATGAGGATCTGTCTCAGTGCTAATCCCACCAATAGCAGTGTGACAGGAAACAAGGGCTGACCAGACGGCTTTGTGTCTCAAAGACCTTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861300 True 212 lncRNA 0.50 1 43032597 43032808

Neighbor

gene id symbol gene type direction distance location
LOC110498356 NA coding upstream 155255 42862652 ~ 42877342 (+)
LOC110497923 LOC106590872 coding upstream 221119 42790955 ~ 42811478 (+)
ttll5 ttll5 coding upstream 266847 42671240 ~ 42765750 (+)
LOC110497918 LOC106591116 coding upstream 365872 42636445 ~ 42666725 (+)
LOC110497917 atf3 coding upstream 404497 42620570 ~ 42628100 (+)
LOC110497925 LOC106590001 coding downstream 78894 43111702 ~ 43125556 (+)
LOC110498360 LOC106589621 coding downstream 141970 43174778 ~ 43210365 (+)
LOC110497931 LOC106589425 coding downstream 246465 43279273 ~ 43440028 (+)
LOC110498578 LOC106589566 coding downstream 410525 43443333 ~ 43445749 (+)
LOC110497932 LOC106611063 coding downstream 415923 43448731 ~ 43474668 (+)
G1626605 NA non-coding upstream 6884 43025432 ~ 43025713 (+)
G1626596 NA non-coding upstream 23272 43009101 ~ 43009325 (+)
G1626594 NA non-coding upstream 24213 43008109 ~ 43008384 (+)
G1626593 NA non-coding upstream 24603 43007785 ~ 43007994 (+)
G1626561 NA non-coding upstream 66581 42965782 ~ 42966016 (+)
G1626656 NA non-coding downstream 11277 43044085 ~ 43044319 (+)
G1626657 NA non-coding downstream 12123 43044931 ~ 43045585 (+)
G1626660 NA non-coding downstream 13888 43046696 ~ 43046929 (+)
G1626666 NA non-coding downstream 15568 43048376 ~ 43048655 (+)
G1626679 NA non-coding downstream 58781 43091589 ~ 43091791 (+)
G1625710 NA other upstream 781026 42250731 ~ 42251571 (+)
G1624524 NA other upstream 995479 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 996653 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 1003091 41988770 ~ 42029506 (+)
G1624560 NA other upstream 1022267 42009961 ~ 42010330 (+)
G1627319 NA other downstream 781918 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 1381514 44414322 ~ 44448672 (+)
G1628486 NA other downstream 1650554 44683362 ~ 44748925 (+)
G1628488 NA other downstream 1655574 44688382 ~ 44747446 (+)

Expression


Co-expression Network