G1626654


Basic Information

Item Value
gene id G1626654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43040149 ~ 43041728 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861349
CAGACTTCTGGGAGTTATTTAATTATTTCTTCCTTTACCTTTTATGAAATCAAAACATAAAGGTGACACCGATATTGGTGATTCAACAATCAGAGATATCAATGTACACTGTTGCCAAATGAAATAATTCACACCATTAATATTTATACTGTAGGAACAGGAAATTATTTTAAGTACCTGTTCCTTAATGCAAGTTTGTCATCAAGGGACCAATTCTGACACATTGATGTTAATAAAAACATGGACCCGCTTCATAACCAAAATGGGTCTCGCCCACTGATAGCCAAATCATGAAGTCAACTTTAAGCACGCTTTACCTTTACAAACAGATATATGGATGGTAAGAGACTACTGGTGACTATAAttacaaatacactacatgaccaaaagtatgtggacacctgctcgtcgaacatctcattccaatatcatgggcattaatgtggagttggtcccccctttgctgctataacagcctccacacttcagggaaggctttccactagatgttggaacattgctgaggggactttcttccattcagccacaagagaattagtgagttcgtgcactgatgttgggcgattagacctggctcgtagtcggcattccaattcatcccaaaggtgatcggtggggttgaggtcagggctctgtgtaggccagtcaatttcttagataccgatctcgacaaaccatttctgtaaggaccttgctttgtgcacgggggcattggcATGCTAAAACATGAAGGGCctactccaaactgttgccacaaatttagAAGCACAGGATTGTCCACAATATCATTATATGCTGTAGTGTTAggctttcccttcactggaactaaggggcctactgtagcccgaaccatgaaaaacagccccagactattatgcattggggcaggtagcattctcctggcatccgccaaacccagaatcgtccattggactgccagatggtgaagtgtgattcatcactccagagaatgtgtgtACACCTGTCCGGAGACCAATGGTGGCGAACTTTtggtagtgattTTTATGcactatgtgcttcagcacttcgcggtcccattctgtgagcttgtgtggcctaccatttcgcggctgagccaatgttgctcctagacgtttccacttcacaataacagcacttacatttgaccggggcagctctagcagggcagaaatgtgacttgttggaaaggtggcatccaataacggtgccacgttgaaagacactgagctcttcagtaaggccattctactgtcaatgtttgtttatggagattgcatggctgtgtgctcaattttatacacctgtcagcaatgggtgtggttgaaatagccaaatccactaattggaagggatgtccacatacttttgtgtgtatagtgtatctTGGCAGGGGCATTTCTAGACAATAAATCTTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861349 True 1441 lncRNA 0.44 2 43040149 43041728

Neighbor

gene id symbol gene type direction distance location
tgfb3 LOC106590795 coding downstream 254085 42764877 ~ 42786064 (-)
erg28 LOC106591002 coding downstream 369068 42669036 ~ 42671081 (-)
LOC110497915 LOC106591465 coding downstream 435385 42601758 ~ 42604764 (-)
LOC110497913 NA coding downstream 468692 42570828 ~ 42571457 (-)
eml5 LOC106591625 coding downstream 478180 42494458 ~ 42561969 (-)
LOC110498358 LOC106590063 coding upstream 58497 43100225 ~ 43110498 (-)
LOC110497926 LOC106589845 coding upstream 83706 43125434 ~ 43135492 (-)
LOC110498359 LOC106599825 coding upstream 94472 43136200 ~ 43139430 (-)
LOC110497927 lrrc74a coding upstream 99794 43141522 ~ 43148464 (-)
LOC110497929 LOC106589786 coding upstream 120770 43162498 ~ 43171448 (-)
G1626655 NA non-coding downstream 296 43039183 ~ 43039853 (-)
G1626651 LOC107092401 non-coding downstream 6431 43033112 ~ 43033718 (-)
G1626645 NA non-coding downstream 14601 43025274 ~ 43025548 (-)
G1626643 NA non-coding downstream 16682 43023236 ~ 43023467 (-)
G1626638 NA non-coding downstream 21860 43018051 ~ 43018289 (-)
G1626961 NA non-coding upstream 145297 43187025 ~ 43212755 (-)
G1626959 NA non-coding upstream 164143 43205871 ~ 43206971 (-)
G1626960 LOC106589621 non-coding upstream 165975 43207703 ~ 43208758 (-)
G1626958 NA non-coding upstream 167488 43209216 ~ 43210618 (-)
G1627022 NA non-coding upstream 264952 43306680 ~ 43320208 (-)
G1626324 NA other downstream 201715 42759294 ~ 42838434 (-)
G1626232 LOC106611303 other downstream 398876 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 569447 42465705 ~ 42480874 (-)
G1626105 NA other downstream 784352 42255235 ~ 42255797 (-)
G1625428 arf6 other downstream 1189716 41846255 ~ 41850433 (-)
G1627068 NA other upstream 366999 43408727 ~ 43409109 (-)
LOC110498001 NA other upstream 2962037 46003765 ~ 46008718 (-)
G1631005 NA other upstream 3577479 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 3788606 46830334 ~ 46830650 (-)
G1632192 LOC106575636 other upstream 4874567 47916295 ~ 47980466 (-)

Expression


Co-expression Network