G1626958


Basic Information

Item Value
gene id G1626958
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43209216 ~ 43210618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861693
GTAGCAAACCGTTTGTTCTTTTGAAAATCCATGTATTTGTAAACTGAAGTCATTGTGGATGTGAAACGATGATAACTAAAAAATACATGAAATCAGCTGTAACGTGTTAAACTCCCACCAATAAAAAAGTATGACCTCAAAGATCTATCAAGTACTTTTAGTCCCTTCTGTTTGAAAATATATCTGAACTGTTGCTATGACAACCTTTTAACATGCATGTACACATATTGAAATGAAAGAGggatataatatatactgtatatacatttgacattttaatcATTTAGCAGAGCGACTTAAAGTATgagtacatacattttcatacttttcacagtatatacacacacatccttCCCTGATCAGGTAAGGCCAAAGTGCTATGGGGTGCGCAGCTTCTCCACACTTTGTGTAGGCTGCTTTTGCATTTAAATGTTCCTCAGCTTTTTTCCAAAATAAAATTCAAAAAACCAAAACAACACCAAGCTCACTAGGCTCTTTAACTAGCTCTATATTCTGTCTCAAAAACGTAAAATTAAACAGCTCTAACATCTAGAATAAAACTACCCAGCCTTTTCTAACACTAGGTCATGTTCTTCATTAGAAAAGCaaacattgtacagtatatacacatagtGCAGACACCTGACGACGTCCCAGAGCCTCCTGGACTTCCTGTGGAATTCCTTTAATGCCCTCTACCGCTGAAAGAGGATCATGGGTAGCCCGTGTGAGTCGAGGAGGGATGTCCATTGTCCAAAGCGGATGGAGCGGGTAACAGGCGTACCAGGGGCCTGGTTGGTGCTGGTGTCATTGGTACCCCACTGCTGTATGAGCAGGACCACAGTGTGACCAGAGTCTGGGGGTGAGCTCCAGGGATAGGGCCACTCAGAGTCTGGGGGTGAGCTCCAGGAATAGGGCCACTCAGAGTCTGGGGGTGAGCTCCAGGGATAGGGCCACTCAGAGTCTGGGGGTGAGCTCCAGGGATAGGGCCACTCAGAGTCTGGGGGTGAGCTCCAGGGATAGGGCCACTCAGAGCATGCCGAAGCCCTCACTGCCCTCACTGATGGCCAGCTTCAGCATCTTGTGCAGCTCCTCATAGGAATCATAGGTGGGGA

Function

NR:

description
PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861693 True 1115 lncRNA 0.45 3 43209216 43210618

Neighbor

gene id symbol gene type direction distance location
LOC110497930 LOC106589732 coding downstream 34361 43171743 ~ 43174855 (-)
LOC110497929 LOC106589786 coding downstream 37768 43162498 ~ 43171448 (-)
LOC110497927 lrrc74a coding downstream 60752 43141522 ~ 43148464 (-)
LOC110498359 LOC106599825 coding downstream 69786 43136200 ~ 43139430 (-)
LOC110497926 LOC106589845 coding downstream 73724 43125434 ~ 43135492 (-)
LOC110497934 LOC106589256 coding upstream 301350 43511968 ~ 43526477 (-)
LOC110497935 LOC106589171 coding upstream 346605 43557223 ~ 43582363 (-)
LOC110497940 LOC106588600 coding upstream 529354 43739972 ~ 43805811 (-)
LOC110497941 LOC106588489 coding upstream 604093 43814711 ~ 43890059 (-)
gpx2 gpx2 coding upstream 695785 43906403 ~ 43907894 (-)
G1626960 LOC106589621 non-coding downstream 458 43207703 ~ 43208758 (-)
G1626959 NA non-coding downstream 2245 43205871 ~ 43206971 (-)
G1626654 NA non-coding downstream 167488 43040149 ~ 43041728 (-)
G1626655 NA non-coding downstream 169363 43039183 ~ 43039853 (-)
G1626651 LOC107092401 non-coding downstream 175498 43033112 ~ 43033718 (-)
G1627022 NA non-coding upstream 96062 43306680 ~ 43320208 (-)
G1627024 NA non-coding upstream 98641 43309259 ~ 43310471 (-)
G1627070 NA non-coding upstream 202410 43413028 ~ 43413229 (-)
G1627074 NA non-coding upstream 205538 43416156 ~ 43416403 (-)
G1627075 NA non-coding upstream 209055 43419673 ~ 43420118 (-)
G1626324 NA other downstream 370782 42759294 ~ 42838434 (-)
G1626232 LOC106611303 other downstream 567943 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 738514 42465705 ~ 42480874 (-)
G1626105 NA other downstream 953419 42255235 ~ 42255797 (-)
G1625428 arf6 other downstream 1358783 41846255 ~ 41850433 (-)
G1627068 NA other upstream 198109 43408727 ~ 43409109 (-)
LOC110498001 NA other upstream 2793147 46003765 ~ 46008718 (-)
G1631005 NA other upstream 3408589 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 3619716 46830334 ~ 46830650 (-)
G1632192 LOC106575636 other upstream 4705677 47916295 ~ 47980466 (-)

Expression


Co-expression Network