G1627076



Basic Information


Item Value
gene id G1627076
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43420120 ~ 43420459 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1861820
atggggtattgtgtgcagatgggtGAAAAAAATGTACGTAATCCACtgtgaattcaggctgtaacacaaaaaaatggaataagtcaaggggcatgaatactttctgaaggcactgtatttgtctcTGTGGTTGTGTTGGGATCCTAGAATTCCACTtttgatgtgtttgtgtgtgtacctctaCAGGACGTCCCATCCACCAGCTCCAGACCCGGGGGACAGGAGCAGCTGTAGGAGCCGGGGCTGTTGGTGCACTGTCCTCCCAGACACAGACCGCTGTCCTCACACTCATTGATGTCTGCCGGGGAGGGGACACGGAGGGGAAACACACATACCATAC

Function


NR:

description
latent-transforming growth factor beta-binding protein 2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1861820 True 340 lncRNA 0.50 1 43420120 43420459

Neighbor


gene id symbol gene type direction distance location
LOC110497930 LOC106589732 coding downstream 245265 43171743 ~ 43174855 (-)
LOC110497929 LOC106589786 coding downstream 248672 43162498 ~ 43171448 (-)
LOC110497927 lrrc74a coding downstream 271656 43141522 ~ 43148464 (-)
LOC110498359 LOC106599825 coding downstream 280690 43136200 ~ 43139430 (-)
LOC110497926 LOC106589845 coding downstream 284628 43125434 ~ 43135492 (-)
LOC110497934 LOC106589256 coding upstream 91509 43511968 ~ 43526477 (-)
LOC110497935 LOC106589171 coding upstream 136764 43557223 ~ 43582363 (-)
LOC110497940 LOC106588600 coding upstream 319513 43739972 ~ 43805811 (-)
LOC110497941 LOC106588489 coding upstream 394252 43814711 ~ 43890059 (-)
gpx2 gpx2 coding upstream 485944 43906403 ~ 43907894 (-)
G1627075 NA non-coding downstream 2 43419673 ~ 43420118 (-)
G1627074 NA non-coding downstream 3717 43416156 ~ 43416403 (-)
G1627070 NA non-coding downstream 6891 43413028 ~ 43413229 (-)
G1627022 NA non-coding downstream 99912 43306680 ~ 43320208 (-)
G1627024 NA non-coding downstream 109649 43309259 ~ 43310471 (-)
G1627091 NA non-coding upstream 14508 43434967 ~ 43435467 (-)
G1627128 NA non-coding upstream 73917 43494376 ~ 43494708 (-)
G1627133 NA non-coding upstream 76843 43497302 ~ 43497544 (-)
G1627084 NA non-coding upstream 89334 43509793 ~ 43510142 (-)
G1627139 NA non-coding upstream 95957 43516416 ~ 43522659 (-)
G1627068 NA other downstream 11011 43408727 ~ 43409109 (-)
G1626324 NA other downstream 581686 42759294 ~ 42838434 (-)
G1626232 LOC106611303 other downstream 778847 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 949418 42465705 ~ 42480874 (-)
G1626105 NA other downstream 1164323 42255235 ~ 42255797 (-)
LOC110498001 NA other upstream 2583306 46003765 ~ 46008718 (-)
G1631005 NA other upstream 3198748 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 3409875 46830334 ~ 46830650 (-)
G1632192 LOC106575636 other upstream 4495836 47916295 ~ 47980466 (-)
G1632228 NA other upstream 4548055 47968514 ~ 47970332 (-)

Expression



Co-expression Network