G1626848


Basic Information

Item Value
gene id G1626848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43446287 ~ 43447721 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861563
aaggaccttgtgaagatgctgaaggaaacaggtgtttggccataatgaccatgtttggagggaaaagggggaagaTTGCAAGctgaataacaccatcccaaccgtgaagcacgggtggcagcatgttgtgggggtgctttgctgcaggagggactagtgcacttcacaaaatagatggcattacgAGGAGGAAAAttgtgggtatattgaagcaacatctcaagacctcagtcaggaaactaaagcttggtcgcaaatgggtcttccaaataggcaatgacctcaagcatacttccaaaatgtGGCAATAGCAGGCCACCCTGCTAGAGTGCTGACCTGTGGCTCTGCCTACACTATTCCCACTGGCTGCTCAGAGGAGGACAGGCAATGCTATTCTTCACCATCCTCTACAGTGTTtggggctccagagtggcgcagcggtctaaggcactatctcagtgctagaggcgtcactacagaccctggtttgattcaaggctgtatcacaaccggccgtgattgggagtcgcatcgggtggcgcacaattggctcagcattgtctgggttagaccgtcattgtaaataagaatttgttcttaactgacttgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861563 True 611 lncRNA 0.50 2 43446287 43447721

Neighbor

gene id symbol gene type direction distance location
LOC110498578 LOC106589566 coding upstream 538 43443333 ~ 43445749 (+)
LOC110497931 LOC106589425 coding upstream 6259 43279273 ~ 43440028 (+)
LOC110498360 LOC106589621 coding upstream 235922 43174778 ~ 43210365 (+)
LOC110497925 LOC106590001 coding upstream 320731 43111702 ~ 43125556 (+)
LOC110497924 esrrb coding upstream 406628 42982245 ~ 43039659 (+)
LOC110497932 LOC106611063 coding downstream 1010 43448731 ~ 43474668 (+)
LOC110497933 LOC106589343 coding downstream 35743 43483464 ~ 43490666 (+)
LOC110498579 LOC106599786 coding downstream 135926 43583647 ~ 43587510 (+)
LOC110497936 LOC106589077 coding downstream 180404 43628125 ~ 43635200 (+)
LOC110498580 LOC106599766 coding downstream 190758 43638479 ~ 43643478 (+)
G1626836 NA non-coding upstream 23550 43422518 ~ 43422737 (+)
G1626801 NA non-coding upstream 95712 43344516 ~ 43350575 (+)
G1626742 NA non-coding upstream 215223 43230174 ~ 43231064 (+)
G1626715 NA non-coding upstream 294770 43149729 ~ 43151517 (+)
G1626877 NA non-coding downstream 33257 43480978 ~ 43481227 (+)
G1626885 NA non-coding downstream 46522 43494243 ~ 43494481 (+)
G1626892 NA non-coding downstream 56277 43503998 ~ 43504418 (+)
G1626893 NA non-coding downstream 57861 43505582 ~ 43505804 (+)
G1627148 NA non-coding downstream 82788 43530509 ~ 43530720 (+)
G1625710 NA other upstream 1194716 42250731 ~ 42251571 (+)
G1624524 NA other upstream 1409169 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 1410343 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 1416781 41988770 ~ 42029506 (+)
G1627319 NA other downstream 367005 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 966601 44414322 ~ 44448672 (+)
G1628486 NA other downstream 1235641 44683362 ~ 44748925 (+)
G1628488 NA other downstream 1240661 44688382 ~ 44747446 (+)
G1628550 NA other downstream 1382201 44829922 ~ 44886234 (+)

Expression


Co-expression Network