G1626893


Basic Information

Item Value
gene id G1626893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43505582 ~ 43505804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861608
CCCAGAGACTGTTCTGGCAAATGCTGTTGCCGTGGAGAGGAACATGTTGCTGTGCAGCTAAGGTGTGAGGGCAGATAAGCATGCTTGTGAACAGGTTCAAAGACGCACTGGACTCTGAAGTGAAGCTGTGGCTCTTGAAAGAAGCTGGGCTTTATTAGAGATTGATGCTGATGGCTAGGCTGCTGAATCTGTATGTCTTCATTTCTTTTTTTCTAAAGAAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861608 True 223 lncRNA 0.46 1 43505582 43505804

Neighbor

gene id symbol gene type direction distance location
LOC110497933 LOC106589343 coding upstream 14916 43483464 ~ 43490666 (+)
LOC110497932 LOC106611063 coding upstream 30914 43448731 ~ 43474668 (+)
LOC110498578 LOC106589566 coding upstream 59833 43443333 ~ 43445749 (+)
LOC110497931 LOC106589425 coding upstream 65554 43279273 ~ 43440028 (+)
LOC110498360 LOC106589621 coding upstream 295217 43174778 ~ 43210365 (+)
LOC110498579 LOC106599786 coding downstream 77843 43583647 ~ 43587510 (+)
LOC110497936 LOC106589077 coding downstream 122321 43628125 ~ 43635200 (+)
LOC110498580 LOC106599766 coding downstream 132675 43638479 ~ 43643478 (+)
LOC110497938 LOC106588908 coding downstream 178454 43684258 ~ 43694931 (+)
LOC110498362 LOC106588971 coding downstream 189418 43695222 ~ 43735408 (+)
G1626892 NA non-coding upstream 1164 43503998 ~ 43504418 (+)
G1626885 NA non-coding upstream 11101 43494243 ~ 43494481 (+)
G1626877 NA non-coding upstream 24355 43480978 ~ 43481227 (+)
G1626848 NA non-coding upstream 57861 43446287 ~ 43447721 (+)
G1626836 NA non-coding upstream 82845 43422518 ~ 43422737 (+)
G1627148 NA non-coding downstream 24705 43530509 ~ 43530720 (+)
G1627157 NA non-coding downstream 30248 43536052 ~ 43536262 (+)
G1627212 NA non-coding downstream 90150 43595954 ~ 43596319 (+)
G1627353 NA non-coding downstream 285894 43791698 ~ 43792446 (+)
G1625710 NA other upstream 1254011 42250731 ~ 42251571 (+)
G1624524 NA other upstream 1468464 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 1469638 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 1476076 41988770 ~ 42029506 (+)
G1627319 NA other downstream 308922 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 908518 44414322 ~ 44448672 (+)
G1628486 NA other downstream 1177558 44683362 ~ 44748925 (+)
G1628488 NA other downstream 1182578 44688382 ~ 44747446 (+)
G1628550 NA other downstream 1324118 44829922 ~ 44886234 (+)

Expression


Co-expression Network