G1627157


Basic Information

Item Value
gene id G1627157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43536052 ~ 43536262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1861913
gtgtgggggctatgctttagcaaagtgggtggggttatagccTTAGTCCCCAGTATCTATTCTGCAAGAATCTATGTGCTGGGGGTCTAtggtcagtctgtcctatctggtgtaattctcctgtcttatctggtgtcctgtgtgatttTAGGTATGCTTCCTATAAttctcacatctctctcctctctctctctatctcccctcccagagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861913 True 211 lncRNA 0.47 1 43536052 43536262

Neighbor

gene id symbol gene type direction distance location
LOC110497933 LOC106589343 coding upstream 45386 43483464 ~ 43490666 (+)
LOC110497932 LOC106611063 coding upstream 61384 43448731 ~ 43474668 (+)
LOC110498578 LOC106589566 coding upstream 90303 43443333 ~ 43445749 (+)
LOC110497931 LOC106589425 coding upstream 96024 43279273 ~ 43440028 (+)
LOC110498360 LOC106589621 coding upstream 325687 43174778 ~ 43210365 (+)
LOC110498579 LOC106599786 coding downstream 47385 43583647 ~ 43587510 (+)
LOC110497936 LOC106589077 coding downstream 91863 43628125 ~ 43635200 (+)
LOC110498580 LOC106599766 coding downstream 102217 43638479 ~ 43643478 (+)
LOC110497938 LOC106588908 coding downstream 147996 43684258 ~ 43694931 (+)
LOC110498362 LOC106588971 coding downstream 158960 43695222 ~ 43735408 (+)
G1627148 NA non-coding upstream 5332 43530509 ~ 43530720 (+)
G1626893 NA non-coding upstream 30248 43505582 ~ 43505804 (+)
G1626892 NA non-coding upstream 31634 43503998 ~ 43504418 (+)
G1626885 NA non-coding upstream 41571 43494243 ~ 43494481 (+)
G1626877 NA non-coding upstream 54825 43480978 ~ 43481227 (+)
G1627212 NA non-coding downstream 59692 43595954 ~ 43596319 (+)
G1627353 NA non-coding downstream 255436 43791698 ~ 43792446 (+)
G1627367 NA non-coding downstream 276609 43812871 ~ 43813077 (+)
G1627319 NA non-coding downstream 278331 43814593 ~ 43816501 (+)
G1625710 NA other upstream 1284481 42250731 ~ 42251571 (+)
G1624524 NA other upstream 1498934 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 1500108 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 1506546 41988770 ~ 42029506 (+)
G1628073 LOC106610840 other downstream 878060 44414322 ~ 44448672 (+)
G1628486 NA other downstream 1147100 44683362 ~ 44748925 (+)
G1628488 NA other downstream 1152120 44688382 ~ 44747446 (+)
G1628550 NA other downstream 1293660 44829922 ~ 44886234 (+)

Expression


Co-expression Network