G1627367


Basic Information

Item Value
gene id G1627367
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43812871 ~ 43813077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862158
gttttgcggccggagtccgcacctttgggggggggtactgtcacgttctgacctctatttccgttgtttttgtatttatttagtatggtcagggcgtgagttgggtgggtagtctatgtttgtttttctatgttttggtctagttctatgttcggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862158 True 207 lncRNA 0.47 1 43812871 43813077

Neighbor

gene id symbol gene type direction distance location
LOC110498362 LOC106588971 coding upstream 77463 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 117940 43684258 ~ 43694931 (+)
LOC110498580 LOC106599766 coding upstream 169393 43638479 ~ 43643478 (+)
LOC110497936 LOC106589077 coding upstream 177848 43628125 ~ 43635200 (+)
LOC110498579 LOC106599786 coding upstream 225361 43583647 ~ 43587510 (+)
LOC110497947 LOC106588052 coding downstream 113995 43927072 ~ 43931372 (+)
LOC110497948 NA coding downstream 131548 43944625 ~ 43946674 (+)
zgc:194887 LOC106587488 coding downstream 350955 44164032 ~ 44167404 (+)
LOC118941479 LOC106586952 coding downstream 597172 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 627065 44440142 ~ 44501752 (+)
G1627353 NA non-coding upstream 20425 43791698 ~ 43792446 (+)
G1627212 NA non-coding upstream 216552 43595954 ~ 43596319 (+)
G1627157 NA non-coding upstream 276609 43536052 ~ 43536262 (+)
G1627148 NA non-coding upstream 282151 43530509 ~ 43530720 (+)
G1627319 NA non-coding downstream 1516 43814593 ~ 43816501 (+)
G1627368 NA non-coding downstream 4378 43817455 ~ 43817909 (+)
G1627370 NA non-coding downstream 5840 43818917 ~ 43819117 (+)
G1627374 NA non-coding downstream 14898 43827975 ~ 43828205 (+)
G1627389 NA non-coding downstream 37337 43850414 ~ 43850717 (+)
LOC110497931 LOC106589425 other upstream 405744 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1561300 42250731 ~ 42251571 (+)
G1624524 NA other upstream 1775753 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 1776927 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 1783365 41988770 ~ 42029506 (+)
G1628073 LOC106610840 other downstream 601245 44414322 ~ 44448672 (+)
G1628486 NA other downstream 870285 44683362 ~ 44748925 (+)
G1628488 NA other downstream 875305 44688382 ~ 44747446 (+)
G1628550 NA other downstream 1016845 44829922 ~ 44886234 (+)

Expression


Co-expression Network