G1627368


Basic Information

Item Value
gene id G1627368
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43817455 ~ 43817909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862159
TTTGCCTACCCTCGAAGGCCTTCGCAGCATCTACCAGGTTGGACCAGTCCAGAGCGCGGTCAGCTCCAGAGTTAGGTAGGGGTATGAGGCCTGGGTCCCCCAGCTGCTTCCTCATGCCCCCCTGGTCCTGGCTGGACAACTCACACAGGTCACCtgaaaggggggaggagagagggaggagagacagcagaTTACAACAAAGCCCCAACATATCAGAAGCCTTTCCCATCAAATAAAGCACTAAAAAAGATGACCAATTATACTCCATATACACATAATGGTAAACACACTTAAACCTcttggtactagggggcagtattttcattttaaacgggatattaaacgggatattttgtcaggaaaagatgctaaaatatgcatagaattgacagctttggatagaaaacactctatcgtttccaaaactgtaaagatattgtctgtgagtataacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862159 True 455 lncRNA 0.45 1 43817455 43817909

Neighbor

gene id symbol gene type direction distance location
LOC110498362 LOC106588971 coding upstream 82047 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 122524 43684258 ~ 43694931 (+)
LOC110498580 LOC106599766 coding upstream 173977 43638479 ~ 43643478 (+)
LOC110497936 LOC106589077 coding upstream 182432 43628125 ~ 43635200 (+)
LOC110498579 LOC106599786 coding upstream 229945 43583647 ~ 43587510 (+)
LOC110497947 LOC106588052 coding downstream 109163 43927072 ~ 43931372 (+)
LOC110497948 NA coding downstream 126716 43944625 ~ 43946674 (+)
zgc:194887 LOC106587488 coding downstream 346123 44164032 ~ 44167404 (+)
LOC118941479 LOC106586952 coding downstream 592340 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 622233 44440142 ~ 44501752 (+)
G1627319 NA non-coding upstream 1314 43814593 ~ 43816501 (+)
G1627367 NA non-coding upstream 4378 43812871 ~ 43813077 (+)
G1627353 NA non-coding upstream 25009 43791698 ~ 43792446 (+)
G1627212 NA non-coding upstream 221136 43595954 ~ 43596319 (+)
G1627370 NA non-coding downstream 1008 43818917 ~ 43819117 (+)
G1627374 NA non-coding downstream 10066 43827975 ~ 43828205 (+)
G1627389 NA non-coding downstream 32505 43850414 ~ 43850717 (+)
G1627390 NA non-coding downstream 32897 43850806 ~ 43859650 (+)
G1627446 NA non-coding downstream 123951 43941860 ~ 43942395 (+)
LOC110497931 LOC106589425 other upstream 410328 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1565884 42250731 ~ 42251571 (+)
G1624524 NA other upstream 1780337 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 1781511 42035353 ~ 42035944 (+)
G1628073 LOC106610840 other downstream 596413 44414322 ~ 44448672 (+)
G1628486 NA other downstream 865453 44683362 ~ 44748925 (+)
G1628488 NA other downstream 870473 44688382 ~ 44747446 (+)
G1628550 NA other downstream 1012013 44829922 ~ 44886234 (+)
G1628689 NA other downstream 1068962 44886871 ~ 44887173 (+)

Expression


Co-expression Network