G1627374


Basic Information

Item Value
gene id G1627374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43827975 ~ 43828205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862165
TGTTGCCAAAGTCCACAGAGTTGATGGTGCCTCCAGGCTTCCTCCAGCCGATAAGGAACTTGGAGGTGGCTCCCTGGCGGGGGTAGAAGCTCTTGGGGGCTccaggggaaagggaagtgtgggaGGTAGGGGAGGTGGTCAGGGCTGACTCCTCCTGGGAGGAGCTGGGGCTGCAGCCTGGACCCATGGGACTGCCTGAGTGGCTCGAACTCAGAGTACTGGGAGGGAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862165 True 231 lncRNA 0.61 1 43827975 43828205

Neighbor

gene id symbol gene type direction distance location
LOC110498362 LOC106588971 coding upstream 92567 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 133044 43684258 ~ 43694931 (+)
LOC110498580 LOC106599766 coding upstream 184497 43638479 ~ 43643478 (+)
LOC110497936 LOC106589077 coding upstream 192952 43628125 ~ 43635200 (+)
LOC110498579 LOC106599786 coding upstream 240465 43583647 ~ 43587510 (+)
LOC110497947 LOC106588052 coding downstream 98867 43927072 ~ 43931372 (+)
LOC110497948 NA coding downstream 116420 43944625 ~ 43946674 (+)
zgc:194887 LOC106587488 coding downstream 335827 44164032 ~ 44167404 (+)
LOC118941479 LOC106586952 coding downstream 582044 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 611937 44440142 ~ 44501752 (+)
G1627370 NA non-coding upstream 8858 43818917 ~ 43819117 (+)
G1627368 NA non-coding upstream 10066 43817455 ~ 43817909 (+)
G1627319 NA non-coding upstream 11834 43814593 ~ 43816501 (+)
G1627367 NA non-coding upstream 14898 43812871 ~ 43813077 (+)
G1627353 NA non-coding upstream 35529 43791698 ~ 43792446 (+)
G1627389 NA non-coding downstream 22209 43850414 ~ 43850717 (+)
G1627390 NA non-coding downstream 22601 43850806 ~ 43859650 (+)
G1627446 NA non-coding downstream 113655 43941860 ~ 43942395 (+)
G1627537 NA non-coding downstream 260663 44088868 ~ 44089100 (+)
G1627544 NA non-coding downstream 270748 44098953 ~ 44099167 (+)
LOC110497931 LOC106589425 other upstream 420848 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1576404 42250731 ~ 42251571 (+)
G1624524 NA other upstream 1790857 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 1792031 42035353 ~ 42035944 (+)
G1628073 LOC106610840 other downstream 586117 44414322 ~ 44448672 (+)
G1628486 NA other downstream 855157 44683362 ~ 44748925 (+)
G1628488 NA other downstream 860177 44688382 ~ 44747446 (+)
G1628550 NA other downstream 1001717 44829922 ~ 44886234 (+)
G1628689 NA other downstream 1058666 44886871 ~ 44887173 (+)

Expression


Co-expression Network