G1627446


Basic Information

Item Value
gene id G1627446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43941860 ~ 43942395 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862241
gctgacagacagtgacacattgaataccgccttgcacacttaCCTGCgtctagctgatatagggtgtaattattagtccaacagttgcaaacgagagtttatattggacaaattcaggtatgttttgttccgtttgcttccgtttttAAGAAACAtgtttcaacagaatcggcagaatgaatacacccctgatcacttGTAAACAAAGTTCACTTTCATTGCAGtaacgttgtattccttcttgcgCTCTCTTTCTATCCCCTTTTCCCCTCGgttgtggacttcaatgaacaACATGTCAGCTGTATGTGACCCTGGTGAAAAAAACCTTATCAAGCCAAACCAAATTGTTGTCatcatattagctaaagtaaggtcgtagtcaacatagctaatagaacggacgcgttagtaaacctgttacaatcatgtagtaacgttacagtgtacagtcagtaaactgttcaactattgtctttctcctTCTTTGTCTTTGAGTCAACTAATCACCagattttatgcactgcagtgctagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862241 True 536 lncRNA 0.40 1 43941860 43942395

Neighbor

gene id symbol gene type direction distance location
LOC110497947 LOC106588052 coding upstream 10488 43927072 ~ 43931372 (+)
LOC110498362 LOC106588971 coding upstream 206452 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 246929 43684258 ~ 43694931 (+)
LOC110498580 LOC106599766 coding upstream 298382 43638479 ~ 43643478 (+)
LOC110497936 LOC106589077 coding upstream 306837 43628125 ~ 43635200 (+)
LOC110497948 NA coding downstream 2230 43944625 ~ 43946674 (+)
zgc:194887 LOC106587488 coding downstream 221637 44164032 ~ 44167404 (+)
LOC118941479 LOC106586952 coding downstream 467854 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 497747 44440142 ~ 44501752 (+)
LOC110497958 eif2ak4 coding downstream 595111 44537506 ~ 44559873 (+)
G1627390 NA non-coding upstream 82210 43850806 ~ 43859650 (+)
G1627389 NA non-coding upstream 91143 43850414 ~ 43850717 (+)
G1627374 NA non-coding upstream 113655 43827975 ~ 43828205 (+)
G1627370 NA non-coding upstream 122743 43818917 ~ 43819117 (+)
G1627368 NA non-coding upstream 123951 43817455 ~ 43817909 (+)
G1627537 NA non-coding downstream 146473 44088868 ~ 44089100 (+)
G1627544 NA non-coding downstream 156558 44098953 ~ 44099167 (+)
G1627818 NA non-coding downstream 179879 44122274 ~ 44122571 (+)
G1627821 NA non-coding downstream 181196 44123591 ~ 44123869 (+)
G1627822 NA non-coding downstream 182950 44125345 ~ 44125642 (+)
G1627319 NA other upstream 125359 43814593 ~ 43816501 (+)
LOC110497931 LOC106589425 other upstream 534733 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1690289 42250731 ~ 42251571 (+)
G1624524 NA other upstream 1904742 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 1905916 42035353 ~ 42035944 (+)
G1628073 LOC106610840 other downstream 471927 44414322 ~ 44448672 (+)
G1628486 NA other downstream 740967 44683362 ~ 44748925 (+)
G1628488 NA other downstream 745987 44688382 ~ 44747446 (+)
G1628550 NA other downstream 887527 44829922 ~ 44886234 (+)
G1628689 NA other downstream 944476 44886871 ~ 44887173 (+)

Expression


Co-expression Network