XLOC_003547 (slc22a7a)


Basic Information

Item Value
gene id XLOC_003547
gene name slc22a7a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 30729745 ~ 30742966 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006943
CACAGACCGACCAGAAACTAAGCTAATTTCATTGAAAAGATCTACAATCTGATGGCTAAGTAGACAGAAAAGCTATCAAACCTGCTTAGTAGCCTATCTCAAGTTCAAATATGAGGTTCGAGGACGTTCTTCGTGAAATCGGTGGCTTCAACAAGTTCCAGTTTCTAGTTTTATACATCCTATGGCTTCCGCGGGTCATTCTTCCTTTGCATTTTTTGCTCCACAATTTCATCTCCGGGGTTCCTCCTCACCATTGTGCGCTGCCACGTTTGGATGGCAGGTTCTCAGCTAGTGGTGCTGAGAAAGAGGAACTGGCACAGATTGTGGCTCTTGGCATCCCACGTAATTCAGATGGCTCCTACAGCTCCTGCAAGATGTATACAATGCCTATGGACTTTGACCTTAATGGTGACCTTTCGGTATTGTATGGTAACCGGTCAAATGTGTCTGTGCCATGCCAGAATGGATGGGTATATGATCGCTCGCAGTTCACCTCAACAACTGCCACTGAGTGGGATTTAGTATGTGACAATAAAAAGCTAAATCAAGCCCTGGCCACATTTTTCTTCATTGGAGTAACAATGGGTGCTGTCGTATTTGGCCAGTTGTCAGATAAGTTTGGCCGTAAGCCGATGATTCAGGTCTCCTTTGTGAGCAGTGCTGTTTTTGGGATCATTGAGGCTTTTTCTTCATCTTATGTGATGTTCGCCATTGCAAGAACCTTATGTGGTTTTGCCCTGACCGGGATGTCTATCACCACAGTGGCCCTGTGTGTTGAGTGGACAGATGTTAAGCATCGCACCTTTACGGGGACCATCATCAGTCTTGGTTGGAGCGTAGGGAACATGCTCTTGGCTCTTCTGGCGTATCTCATCAGAGACTGGAGGCACCTCATCCTGGTGGTCACGTCACCTTGTCTTGTTGGCATAATAGCCTGGTGGTGGATTCCTGAGTCTGCAAGATGGCTGCTGGCCAATGGAAGAGTGGAAGAGGCGCAGAAGTATCTTATTAACTGTGCGAAGATGAATGGAAAGTACAGTTACACAAAAAAACTAGACATTGAGAACTTGAAGAAAATCACCATCGCTGAAGACTCCAACAAGAACCATTCCTACCTTGATCTCGTGAGGACACCAAAGCTGAGGAAGATTGTGCTTTGCTCAGGGATTTTCTGGTTTGCAGTTGCTTTCACCTACTATGGCATCAGCTTCAACATCACAGGCTTTGGTCTGAACATCTACCTCACGCAGTTCATCTATGGAGTCATTGAAGTCCCAGCTAAGGTCGGGACGTACCTCACTCTGGACCGGATTGGACGGAGAAACGGCCAGGCTTGGTCCCTCATTATAGCAGGAGCTCTGATTGGACTAAACAGCGTAATCCCAACAGAGTTTGCTGCTGTTCGTACAGGAATTGCAGTTATTGGGAAGGGTTTCTCAGAGGCGGCGTTTACCATTGCCTTTCTGTACACATCTGAGCTTTACCCTACTGTACTCCGGCAGTGCGGCTTAGGCTACACCTCTTTTATAGCCCGTATTGGAGGTTCTCTGGCCCCGATGGTCATCCTGTTTGAGGATATTTGGCACTATGGTCCACCGGTAGTGTTTTCAGCCACTGCAGTTTTCAGTGGATGTGTCGTTTTCCTGCTGCCCGAGACCACCAATGTCCAGCTTCCAGAGAACATTCTGGATGTTGAGGAGGGGAGgcACACATTGTCCACAGAAGCAGAGAGAGATGTTGAACTCAATGAGATGAATTCAGGACCAGCGGATTTACAAGAGAAGGGCTCATAAAGGCAATTATTATTAGAAAAATGATTACGTACAGTTTATCATCAGATATGCATTAATGACATCAACTGCAAGACATTTGTGGTGACCAAGGGATAAAAAATCTGATGTTTCTTGAGGATTTCACAACACAAGAGTTAACATGTCATTAAAACTAAACTAAGCGTTGCCTATTAACATAAGCTTATGTATTTTCCCATCTGTGggtttaaaagaataaaatgtaatgttgg

Function

symbol description
slc22a7a Predicted to enable transmembrane transporter activity. Acts upstream of or within anion transmembrane transport. Located in plasma membrane. Is expressed in several structures, including eye; heart; neural crest; pigment cell; and testis. Orthologous to human SLC22A7 (solute carrier family 22 member 7).

GO:

id name namespace
GO:0098656 anion transmembrane transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050506-52 Predicted to enable transmembrane transporter activity. Acts upstream of or within anion transmembrane transport. Located in plasma membrane. Is expressed in several structures, including eye; heart; neural crest; pigment cell; and testis. Orthologous to human SLC22A7 (solute carrier family 22 member 7).

Ensembl:

ensembl_id ENSDARG00000056028

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006943 True 2023 mRNA 0.45 10 30729745 30742966

Neighbor

gene id symbol gene type direction distance location
XLOC_003546 ttbk1a coding upstream 1504 30663300 ~ 30728241 (+)
XLOC_003545 tpcn3 coding upstream 67991 30647545 ~ 30661754 (+)
XLOC_003544 pgap4 coding upstream 87099 30636351 ~ 30642646 (+)
XLOC_003543 CR556713.1 coding upstream 93599 30614485 ~ 30636146 (+)
XLOC_003542 tmem178 coding upstream 198639 30513656 ~ 30531106 (+)
XLOC_003548 wdr83os coding downstream 1300 30744266 ~ 30747836 (+)
XLOC_003549 cacna1ab coding downstream 74977 30817943 ~ 31026335 (+)
XLOC_003550 CR855274.1 coding downstream 231805 30974771 ~ 30974892 (+)
XLOC_003551 CR855274.2 coding downstream 304888 31047854 ~ 31055288 (+)
XLOC_003552 stx10 coding downstream 378374 31121340 ~ 31133573 (+)
XLOC_003369 CR854846.2 misc upstream 14606663 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 18017749 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 18035482 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 18044146 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 18049717 12679732 ~ 12680028 (+)
XLOC_003541 NA non-coding upstream 429691 30298703 ~ 30300054 (+)
XLOC_003537 NA non-coding upstream 476188 30252940 ~ 30253557 (+)
XLOC_003534 NA non-coding upstream 625785 30091155 ~ 30103960 (+)
XLOC_003530 NA non-coding upstream 822916 29905248 ~ 29906829 (+)
XLOC_003524 NA non-coding upstream 1138549 29590873 ~ 29591196 (+)
XLOC_003554 NA non-coding downstream 462020 31204986 ~ 31212769 (+)
XLOC_003555 NA non-coding downstream 462517 31205483 ~ 31209887 (+)
XLOC_003557 NA non-coding downstream 542018 31284984 ~ 31320539 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_06097961_06104051 SLC22A7A coding CI01000306 null 6097590 ~ 6104337 (+)