G1627825


Basic Information

Item Value
gene id G1627825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 44129015 ~ 44129467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862666
gctgcagAGTCtaccaataagaatgtggtgattgacagagtcgaaagccttggccaggtcgatgaagacggctgcacagtaatgtttcctatcaatggcagttatgatgtcgtttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgtatagcggagaaggtacagtgggattcgaaatggtcggtaatctgtttgttaacttggcttttgaagaccttagaaagacagggtaggatagatataggtctgtagcagtttgggtctagagtgtcaccccctttgaagagggggataaccgcggcagctttccaatctttgggaatctcagacgatacgagaggttgaacaggctagtaataggggttgcaacaatttcagcagataattttagaatgaGAGGgtgcagattgtctagcctggctgatttgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862666 True 453 lncRNA 0.47 1 44129015 44129467

Neighbor

gene id symbol gene type direction distance location
LOC110497948 NA coding upstream 182341 43944625 ~ 43946674 (+)
LOC110497947 LOC106588052 coding upstream 197643 43927072 ~ 43931372 (+)
LOC110498362 LOC106588971 coding upstream 393607 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 434084 43684258 ~ 43694931 (+)
LOC110498580 LOC106599766 coding upstream 485537 43638479 ~ 43643478 (+)
zgc:194887 LOC106587488 coding downstream 34565 44164032 ~ 44167404 (+)
LOC118941479 LOC106586952 coding downstream 280782 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 310675 44440142 ~ 44501752 (+)
LOC110497958 eif2ak4 coding downstream 408039 44537506 ~ 44559873 (+)
cyp1c1 cyp1c1 coding downstream 857205 44986672 ~ 44988391 (+)
G1627822 NA non-coding upstream 3373 44125345 ~ 44125642 (+)
G1627821 NA non-coding upstream 5146 44123591 ~ 44123869 (+)
G1627818 NA non-coding upstream 6444 44122274 ~ 44122571 (+)
G1627544 NA non-coding upstream 29848 44098953 ~ 44099167 (+)
G1627537 NA non-coding upstream 39915 44088868 ~ 44089100 (+)
G1627827 NA non-coding downstream 656 44130123 ~ 44130347 (+)
G1627831 NA non-coding downstream 3763 44133230 ~ 44134057 (+)
G1627834 NA non-coding downstream 11028 44140495 ~ 44141631 (+)
G1627830 NA non-coding downstream 15350 44144817 ~ 44159762 (+)
G1627845 NA non-coding downstream 33131 44162598 ~ 44162957 (+)
G1627319 NA other upstream 312514 43814593 ~ 43816501 (+)
LOC110497931 LOC106589425 other upstream 721888 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1877444 42250731 ~ 42251571 (+)
G1624524 NA other upstream 2091897 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 2093071 42035353 ~ 42035944 (+)
G1628073 LOC106610840 other downstream 284855 44414322 ~ 44448672 (+)
G1628486 NA other downstream 553895 44683362 ~ 44748925 (+)
G1628488 NA other downstream 558915 44688382 ~ 44747446 (+)
G1628550 NA other downstream 700455 44829922 ~ 44886234 (+)
G1628689 NA other downstream 757404 44886871 ~ 44887173 (+)

Expression


Co-expression Network