G1627845


Basic Information

Item Value
gene id G1627845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 44162598 ~ 44162957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862688
tatgaggttggaataataatgTGAAATTGTGGAAATGataataatgcccttttagtgtaagagctgtttgaaaagactgacATTTCTGactgttttagtgggatggggtTTTGGTCTTACATGGTACtatcaccatgcggtaaattagttaatagaccaatgagAAAGAGGGTTCCAAACATCTCTGCCAATGACAGCTAATTTCCACTCCAACCACTCCCAGAAAGTCCCAGCAAAGTTCTTGATGAAAgtaattgctctttgctaagaagctatttttgtttctttttgaccattttaattgaaaacaatcacagtaaaagTACTTAGTTGTTACCCATAAGTGATTTGGTATTGAgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862688 True 360 lncRNA 0.36 1 44162598 44162957

Neighbor

gene id symbol gene type direction distance location
LOC110497948 NA coding upstream 215924 43944625 ~ 43946674 (+)
LOC110497947 LOC106588052 coding upstream 231226 43927072 ~ 43931372 (+)
LOC110498362 LOC106588971 coding upstream 427190 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 467667 43684258 ~ 43694931 (+)
LOC110498580 LOC106599766 coding upstream 519120 43638479 ~ 43643478 (+)
zgc:194887 LOC106587488 coding downstream 1075 44164032 ~ 44167404 (+)
LOC118941479 LOC106586952 coding downstream 247292 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 277185 44440142 ~ 44501752 (+)
LOC110497958 eif2ak4 coding downstream 374549 44537506 ~ 44559873 (+)
cyp1c1 cyp1c1 coding downstream 823715 44986672 ~ 44988391 (+)
G1627830 NA non-coding upstream 2836 44144817 ~ 44159762 (+)
G1627834 NA non-coding upstream 20967 44140495 ~ 44141631 (+)
G1627831 NA non-coding upstream 28541 44133230 ~ 44134057 (+)
G1627827 NA non-coding upstream 32251 44130123 ~ 44130347 (+)
G1627825 NA non-coding upstream 33131 44129015 ~ 44129467 (+)
G1627837 LOC106587421 non-coding downstream 5117 44168074 ~ 44170132 (+)
G1627852 NA non-coding downstream 16823 44179780 ~ 44180401 (+)
G1627955 NA non-coding downstream 78031 44240988 ~ 44241318 (+)
G1627956 NA non-coding downstream 78426 44241383 ~ 44241711 (+)
G1628028 NA non-coding downstream 190436 44353393 ~ 44353895 (+)
G1627319 NA other upstream 346097 43814593 ~ 43816501 (+)
LOC110497931 LOC106589425 other upstream 755471 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1911027 42250731 ~ 42251571 (+)
G1624524 NA other upstream 2125480 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 2126654 42035353 ~ 42035944 (+)
G1628073 LOC106610840 other downstream 251365 44414322 ~ 44448672 (+)
G1628486 NA other downstream 520405 44683362 ~ 44748925 (+)
G1628488 NA other downstream 525425 44688382 ~ 44747446 (+)
G1628550 NA other downstream 666965 44829922 ~ 44886234 (+)
G1628689 NA other downstream 723914 44886871 ~ 44887173 (+)

Expression


Co-expression Network