G1627852


Basic Information

Item Value
gene id G1627852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 44179780 ~ 44180401 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862697
gcccagagtaaacggcctgctccgcagtcccagttgctaatatatgcatattattagtcaTATTGGATCAAAAACACTCAGAAAtttctaaaattgtttgaatgatgtctgtgagtataacagaactcatatggcaggcaaaaacctgagaagaaatccaaacaggaagtgggaaatctgaggttggtcgattttcaacccagcccctattgaatacacagtgggatattggttatgttgcacttcctaaggcttccactagatgtcaaccgtctttagaaacttgaatgaggcttctactgtgatatGGGGCCggatgagacctctttgagtcagtggtctggcagagagccaggtcctggtcatgcgcatttcacatgatggtgacctgcgttccatggcttttctacagacaatggaattctccggttggaaagttattgaagatttatgataaaaacgtCCTAAAGATtaattctatacttagtttgaaatgtttctacaacctgtaatataactttttttaagttttcgtccgacgttcggctggacctgcacaagcatttggatttgtgtactaaacgccctaacaaaagtagctacttggacataaataatggac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862697 True 622 lncRNA 0.41 1 44179780 44180401

Neighbor

gene id symbol gene type direction distance location
zgc:194887 LOC106587488 coding upstream 12376 44164032 ~ 44167404 (+)
LOC110497948 NA coding upstream 233106 43944625 ~ 43946674 (+)
LOC110497947 LOC106588052 coding upstream 248408 43927072 ~ 43931372 (+)
LOC110498362 LOC106588971 coding upstream 444372 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 484849 43684258 ~ 43694931 (+)
LOC118941479 LOC106586952 coding downstream 229848 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 259741 44440142 ~ 44501752 (+)
LOC110497958 eif2ak4 coding downstream 357105 44537506 ~ 44559873 (+)
cyp1c1 cyp1c1 coding downstream 806271 44986672 ~ 44988391 (+)
cyp1c2 cyp1c2 coding downstream 811067 44991468 ~ 44993957 (+)
G1627837 LOC106587421 non-coding upstream 9648 44168074 ~ 44170132 (+)
G1627845 NA non-coding upstream 16823 44162598 ~ 44162957 (+)
G1627830 NA non-coding upstream 20018 44144817 ~ 44159762 (+)
G1627834 NA non-coding upstream 38149 44140495 ~ 44141631 (+)
G1627831 NA non-coding upstream 45723 44133230 ~ 44134057 (+)
G1627955 NA non-coding downstream 60587 44240988 ~ 44241318 (+)
G1627956 NA non-coding downstream 60982 44241383 ~ 44241711 (+)
G1628028 NA non-coding downstream 172992 44353393 ~ 44353895 (+)
G1628126 NA non-coding downstream 335045 44515446 ~ 44515964 (+)
G1628129 NA non-coding downstream 344359 44524760 ~ 44525164 (+)
G1627319 NA other upstream 363279 43814593 ~ 43816501 (+)
LOC110497931 LOC106589425 other upstream 772653 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1928209 42250731 ~ 42251571 (+)
G1624524 NA other upstream 2142662 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 2143836 42035353 ~ 42035944 (+)
G1628073 LOC106610840 other downstream 233921 44414322 ~ 44448672 (+)
G1628486 NA other downstream 502961 44683362 ~ 44748925 (+)
G1628488 NA other downstream 507981 44688382 ~ 44747446 (+)
G1628550 NA other downstream 649521 44829922 ~ 44886234 (+)
G1628689 NA other downstream 706470 44886871 ~ 44887173 (+)

Expression


Co-expression Network