G1627956


Basic Information

Item Value
gene id G1627956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 44241383 ~ 44241711 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1862808
CTCAGTGAGAGAGTTGAAGATCTGCTTGGCCACAGCCAGGGCTTTGGAGAAGTTCCGCTGGCCAGCCTCATCCATGATGTCTTTCCCAGAGTAGTACCAGTAGAAATCACTGATGGATTCCTAATATTGGATAAATCAACACAGGACAATATAAACAGACGCTACACATAAAGCATATAGGGAGTGAGGGCGGGGATAGTATTATACCTGCAGACGGAGCAGGTAGTCCACAGTGCTGATGATGATATTTACTGTGGTTGTGTTCCCTGTCTGAGTCCGCAGGAAGTTTTGGAAGTCtgaagaaagggaaagggggtCAAATGGAAAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1862808 True 329 lncRNA 0.46 1 44241383 44241711

Neighbor

gene id symbol gene type direction distance location
zgc:194887 LOC106587488 coding upstream 73979 44164032 ~ 44167404 (+)
LOC110497948 NA coding upstream 294709 43944625 ~ 43946674 (+)
LOC110497947 LOC106588052 coding upstream 310011 43927072 ~ 43931372 (+)
LOC110498362 LOC106588971 coding upstream 505975 43695222 ~ 43735408 (+)
LOC110497938 LOC106588908 coding upstream 546452 43684258 ~ 43694931 (+)
LOC118941479 LOC106586952 coding downstream 168538 44410249 ~ 44430245 (+)
LOC110497955 LOC106586878 coding downstream 198431 44440142 ~ 44501752 (+)
LOC110497958 eif2ak4 coding downstream 295795 44537506 ~ 44559873 (+)
cyp1c1 cyp1c1 coding downstream 744961 44986672 ~ 44988391 (+)
cyp1c2 cyp1c2 coding downstream 749757 44991468 ~ 44993957 (+)
G1627955 NA non-coding upstream 65 44240988 ~ 44241318 (+)
G1627852 NA non-coding upstream 60982 44179780 ~ 44180401 (+)
G1627837 LOC106587421 non-coding upstream 71251 44168074 ~ 44170132 (+)
G1627845 NA non-coding upstream 78426 44162598 ~ 44162957 (+)
G1627830 NA non-coding upstream 81621 44144817 ~ 44159762 (+)
G1628028 NA non-coding downstream 111682 44353393 ~ 44353895 (+)
G1628126 NA non-coding downstream 273735 44515446 ~ 44515964 (+)
G1628129 NA non-coding downstream 283049 44524760 ~ 44525164 (+)
G1628316 NA non-coding downstream 288825 44530536 ~ 44586188 (+)
G1628425 NA non-coding downstream 368283 44609994 ~ 44610230 (+)
G1627319 NA other upstream 424882 43814593 ~ 43816501 (+)
LOC110497931 LOC106589425 other upstream 834256 43279273 ~ 43440028 (+)
G1625710 NA other upstream 1989812 42250731 ~ 42251571 (+)
G1624524 NA other upstream 2204265 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 2205439 42035353 ~ 42035944 (+)
G1628073 LOC106610840 other downstream 172611 44414322 ~ 44448672 (+)
G1628486 NA other downstream 441651 44683362 ~ 44748925 (+)
G1628488 NA other downstream 446671 44688382 ~ 44747446 (+)
G1628550 NA other downstream 588211 44829922 ~ 44886234 (+)
G1628689 NA other downstream 645160 44886871 ~ 44887173 (+)

Expression


Co-expression Network