Gene
RNA
| Item | Value |
|---|---|
| gene id | G1628781 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 44971092 ~ 44971304 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1863679 | True | 213 | lncRNA | 0.37 | 1 | 44971092 | 44971304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497958 | eif2ak4 | coding | upstream | 411219 | 44537506 ~ 44559873 (+) |
| LOC110497955 | LOC106586878 | coding | upstream | 469340 | 44440142 ~ 44501752 (+) |
| LOC118941479 | LOC106586952 | coding | upstream | 540847 | 44410249 ~ 44430245 (+) |
| zgc:194887 | LOC106587488 | coding | upstream | 803688 | 44164032 ~ 44167404 (+) |
| LOC110497948 | NA | coding | upstream | 1024418 | 43944625 ~ 43946674 (+) |
| cyp1c1 | cyp1c1 | coding | downstream | 15368 | 44986672 ~ 44988391 (+) |
| cyp1c2 | cyp1c2 | coding | downstream | 20164 | 44991468 ~ 44993957 (+) |
| LOC110497964 | LOC106583112 | coding | downstream | 79856 | 45051160 ~ 45053552 (+) |
| LOC110497963 | LOC106583053 | coding | downstream | 92933 | 45064237 ~ 45068205 (+) |
| LOC110497966 | LOC106582786 | coding | downstream | 157711 | 45129015 ~ 45147200 (+) |
| G1628737 | NA | non-coding | upstream | 48763 | 44922098 ~ 44922329 (+) |
| G1628717 | NA | non-coding | upstream | 62585 | 44908267 ~ 44908507 (+) |
| G1628708 | NA | non-coding | upstream | 69860 | 44901026 ~ 44901232 (+) |
| G1628546 | NA | non-coding | upstream | 144754 | 44826022 ~ 44826338 (+) |
| G1628537 | NA | non-coding | upstream | 151698 | 44808359 ~ 44819394 (+) |
| G1628783 | NA | non-coding | downstream | 7594 | 44978898 ~ 45040532 (+) |
| G1628840 | djc17 | non-coding | downstream | 115578 | 45086882 ~ 45094330 (+) |
| G1628861 | NA | non-coding | downstream | 147148 | 45118452 ~ 45118655 (+) |
| LOC110497969 | siva1 | non-coding | downstream | 224608 | 45174289 ~ 45198342 (+) |
| G1629028 | NA | non-coding | downstream | 240589 | 45211893 ~ 45212120 (+) |
| G1628689 | NA | other | upstream | 83919 | 44886871 ~ 44887173 (+) |
| G1628550 | NA | other | upstream | 84858 | 44829922 ~ 44886234 (+) |
| G1628486 | NA | other | upstream | 222167 | 44683362 ~ 44748925 (+) |
| G1628488 | NA | other | upstream | 223646 | 44688382 ~ 44747446 (+) |
| G1628073 | LOC106610840 | other | upstream | 522420 | 44414322 ~ 44448672 (+) |
| G1628865 | LOC105030512 | other | downstream | 215658 | 45186962 ~ 45194241 (+) |
| LOC110497977 | LOC106582390 | other | downstream | 327195 | 45298446 ~ 45301424 (+) |
| G1629134 | spit1 | other | downstream | 425527 | 45396831 ~ 45399822 (+) |
| G1629200 | NA | other | downstream | 530490 | 45501794 ~ 45502263 (+) |
