G1628861


Basic Information

Item Value
gene id G1628861
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45118452 ~ 45118655 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1863773
tccatgtcttctccctggacctcctcaatgtccacgtcttgaacatcagactgagacctcatcttcactgtcactttccaaccttatTGAgaatggctcgttgtcaggctcaaagcctcaaatttgcccagatggccaccaatttCTCAACctttgtattggtcagcctgttgcatgctttggtgtgtgtgttcccaaacaagg

Function

NR:

description
uncharacterized protein LOC106675542

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1863773 True 204 lncRNA 0.48 1 45118452 45118655

Neighbor

gene id symbol gene type direction distance location
LOC110497963 LOC106583053 coding upstream 50247 45064237 ~ 45068205 (+)
LOC110497964 LOC106583112 coding upstream 64900 45051160 ~ 45053552 (+)
cyp1c2 cyp1c2 coding upstream 124495 44991468 ~ 44993957 (+)
cyp1c1 cyp1c1 coding upstream 130061 44986672 ~ 44988391 (+)
LOC110497958 eif2ak4 coding upstream 558579 44537506 ~ 44559873 (+)
LOC110497966 LOC106582786 coding downstream 10360 45129015 ~ 45147200 (+)
LOC110497965 LOC100380739 coding downstream 32871 45151526 ~ 45157970 (+)
LOC110497967 adssl2 coding downstream 48245 45166900 ~ 45174085 (+)
LOC110497969 siva1 coding downstream 55634 45174289 ~ 45198342 (+)
LOC110497971 LOC106582637 coding downstream 98346 45217001 ~ 45252828 (+)
G1628840 djc17 non-coding upstream 24122 45086882 ~ 45094330 (+)
G1628783 NA non-coding upstream 77920 44978898 ~ 45040532 (+)
G1628781 NA non-coding upstream 147148 44971092 ~ 44971304 (+)
G1628737 NA non-coding upstream 196123 44922098 ~ 44922329 (+)
G1628717 NA non-coding upstream 209945 44908267 ~ 44908507 (+)
G1629028 NA non-coding downstream 93238 45211893 ~ 45212120 (+)
G1629047 NA non-coding downstream 138245 45256900 ~ 45257116 (+)
G1629069 NA non-coding downstream 192221 45310876 ~ 45377620 (+)
G1628689 NA other upstream 231279 44886871 ~ 44887173 (+)
G1628550 NA other upstream 232218 44829922 ~ 44886234 (+)
G1628486 NA other upstream 369527 44683362 ~ 44748925 (+)
G1628865 LOC105030512 other downstream 68307 45186962 ~ 45194241 (+)
LOC110497977 LOC106582390 other downstream 179844 45298446 ~ 45301424 (+)
G1629134 spit1 other downstream 278176 45396831 ~ 45399822 (+)
G1629200 NA other downstream 383139 45501794 ~ 45502263 (+)
G1629210 NA other downstream 397519 45516174 ~ 45516648 (+)

Expression


Co-expression Network