G1629028


Basic Information

Item Value
gene id G1629028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45211893 ~ 45212120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1863961
TATATATTGTGTATTACGGGTATTGTCCCATGTTGTTCACCGAGGTTTcccctcactcttttgtttgggtacagcccagtgtttttgtatacgtgtttgttttgggtgaaTTAAAAACTCCTGTTGTGTATTCCTGCGCTTGTCtccaaatcctttataccagcATGACAACCGCCAtatagcactcacgtcagtagccatgaagtgctttgaaaggctggtcaaggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1863961 True 228 lncRNA 0.43 1 45211893 45212120

Neighbor

gene id symbol gene type direction distance location
LOC110497969 siva1 coding upstream 13551 45174289 ~ 45198342 (+)
LOC110497967 adssl2 coding upstream 37808 45166900 ~ 45174085 (+)
LOC110497965 LOC100380739 coding upstream 53923 45151526 ~ 45157970 (+)
LOC110497966 LOC106582786 coding upstream 64693 45129015 ~ 45147200 (+)
LOC110497963 LOC106583053 coding upstream 143688 45064237 ~ 45068205 (+)
LOC110497971 LOC106582637 coding downstream 4881 45217001 ~ 45252828 (+)
trnaa-ugc-144 NA coding downstream 30783 45242903 ~ 45242978 (+)
LOC110497972 LOC106582486 coding downstream 53978 45266098 ~ 45291658 (+)
LOC110497973 LOC106583826 coding downstream 79585 45291705 ~ 45296375 (+)
LOC110497977 LOC106582390 coding downstream 86326 45298446 ~ 45301424 (+)
G1628861 NA non-coding upstream 93238 45118452 ~ 45118655 (+)
G1628840 djc17 non-coding upstream 117563 45086882 ~ 45094330 (+)
G1628783 NA non-coding upstream 171361 44978898 ~ 45040532 (+)
G1628781 NA non-coding upstream 240589 44971092 ~ 44971304 (+)
G1629047 NA non-coding downstream 44780 45256900 ~ 45257116 (+)
G1629069 NA non-coding downstream 98756 45310876 ~ 45377620 (+)
G1629113 NA non-coding downstream 166923 45379043 ~ 45379377 (+)
G1629115 NA non-coding downstream 168241 45380361 ~ 45380579 (+)
G1628865 LOC105030512 other upstream 17652 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 158342 45051160 ~ 45053552 (+)
G1628689 NA other upstream 324720 44886871 ~ 44887173 (+)
G1628550 NA other upstream 325659 44829922 ~ 44886234 (+)
G1628488 NA other upstream 464447 44688382 ~ 44747446 (+)
G1629134 spit1 other downstream 184711 45396831 ~ 45399822 (+)
G1629200 NA other downstream 289674 45501794 ~ 45502263 (+)
G1629210 NA other downstream 304054 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 801604 46013724 ~ 46016639 (+)

Expression


Co-expression Network