G1629047


Basic Information

Item Value
gene id G1629047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45256900 ~ 45257116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1863983
aatgtacactgctcaaaaaaataaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaatcaatgtcacatgctgttgtgcaaatggtatagacaacaggtggaaattataggcaattagcaagacacccccaataaaggagtggttctgcaggtggagac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1863983 True 217 lncRNA 0.40 1 45256900 45257116

Neighbor

gene id symbol gene type direction distance location
LOC110497971 LOC106582637 coding upstream 4072 45217001 ~ 45252828 (+)
trnaa-ugc-144 NA coding upstream 13922 45242903 ~ 45242978 (+)
LOC110497969 siva1 coding upstream 58558 45174289 ~ 45198342 (+)
LOC110497967 adssl2 coding upstream 82815 45166900 ~ 45174085 (+)
LOC110497965 LOC100380739 coding upstream 98930 45151526 ~ 45157970 (+)
LOC110497972 LOC106582486 coding downstream 8982 45266098 ~ 45291658 (+)
LOC110497973 LOC106583826 coding downstream 34589 45291705 ~ 45296375 (+)
LOC110497977 LOC106582390 coding downstream 41330 45298446 ~ 45301424 (+)
zgc:162989 pp14b coding downstream 147520 45404636 ~ 45421914 (+)
bub1bb LOC106582108 coding downstream 169959 45427075 ~ 45430207 (+)
G1629028 NA non-coding upstream 44780 45211893 ~ 45212120 (+)
G1628861 NA non-coding upstream 138245 45118452 ~ 45118655 (+)
G1628840 djc17 non-coding upstream 162570 45086882 ~ 45094330 (+)
G1629069 NA non-coding downstream 53760 45310876 ~ 45377620 (+)
G1629113 NA non-coding downstream 121927 45379043 ~ 45379377 (+)
G1629115 NA non-coding downstream 123245 45380361 ~ 45380579 (+)
G1629117 NA non-coding downstream 124194 45381310 ~ 45381540 (+)
G1629120 NA non-coding downstream 126408 45383524 ~ 45383819 (+)
G1628865 LOC105030512 other upstream 62659 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 203349 45051160 ~ 45053552 (+)
G1628689 NA other upstream 369727 44886871 ~ 44887173 (+)
G1628550 NA other upstream 370666 44829922 ~ 44886234 (+)
G1628488 NA other upstream 509454 44688382 ~ 44747446 (+)
G1629134 spit1 other downstream 139715 45396831 ~ 45399822 (+)
G1629200 NA other downstream 244678 45501794 ~ 45502263 (+)
G1629210 NA other downstream 259058 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 756608 46013724 ~ 46016639 (+)

Expression


Co-expression Network