G1629117


Basic Information

Item Value
gene id G1629117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45381310 ~ 45381540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864060
GAagattataagaaatcctgctatgccctccgatgaaccgtcaaacaggaaaagcgttaatacaggactaagatcgaatcgtactaccgGCTCCAATGCTAGTCGgttgtggcagggtttgcaaactattacagactacaaaagtgAAGTacagagctgcccagtgacatgagcctaccagacgagctaaataactcatatgctcgcttcgaggcaagtaacactgaaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864060 True 231 lncRNA 0.45 1 45381310 45381540

Neighbor

gene id symbol gene type direction distance location
LOC110497977 LOC106582390 coding upstream 79886 45298446 ~ 45301424 (+)
LOC110497973 LOC106583826 coding upstream 84935 45291705 ~ 45296375 (+)
LOC110497972 LOC106582486 coding upstream 89652 45266098 ~ 45291658 (+)
LOC110497971 LOC106582637 coding upstream 128482 45217001 ~ 45252828 (+)
zgc:162989 pp14b coding downstream 23096 45404636 ~ 45421914 (+)
bub1bb LOC106582108 coding downstream 45535 45427075 ~ 45430207 (+)
LOC110497981 LOC106581963 coding downstream 63286 45444826 ~ 45470840 (+)
si:dkey-248g15.3 NA coding downstream 252094 45633634 ~ 45635163 (+)
LOC110497986 LOC106581668 coding downstream 281602 45663142 ~ 45672367 (+)
G1629115 NA non-coding upstream 731 45380361 ~ 45380579 (+)
G1629113 NA non-coding upstream 1933 45379043 ~ 45379377 (+)
G1629069 NA non-coding upstream 3690 45310876 ~ 45377620 (+)
G1629047 NA non-coding upstream 124194 45256900 ~ 45257116 (+)
G1629120 NA non-coding downstream 1984 45383524 ~ 45383819 (+)
G1629152 NA non-coding downstream 60002 45441542 ~ 45442461 (+)
G1629155 NA non-coding downstream 64288 45445828 ~ 45446058 (+)
G1629158 NA non-coding downstream 67686 45449226 ~ 45449440 (+)
G1629166 NA non-coding downstream 77085 45458625 ~ 45458857 (+)
G1628865 LOC105030512 other upstream 187069 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 327759 45051160 ~ 45053552 (+)
G1628689 NA other upstream 494137 44886871 ~ 44887173 (+)
G1628550 NA other upstream 495076 44829922 ~ 44886234 (+)
G1629134 spit1 other downstream 15291 45396831 ~ 45399822 (+)
G1629200 NA other downstream 120254 45501794 ~ 45502263 (+)
G1629210 NA other downstream 134634 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 632184 46013724 ~ 46016639 (+)
G1629912 NA other downstream 843842 46225382 ~ 46225820 (+)

Expression


Co-expression Network