G1629166


Basic Information

Item Value
gene id G1629166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45458625 ~ 45458857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864115
gttcttccaccccaatctcgacaaaccatttctgtatggacctcgctttgtgcatggggcattgtcatgctgaaatatgaaagggacttccccaaactgttgccacaaagttggaagcacagaatcgtttagaatgtcattgtatgctgtagcgttaagatttcccttcactggaactaaggggcttagcccgaaccatgaaaaacagtcccagaccattattcttcctccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864115 True 233 lncRNA 0.45 1 45458625 45458857

Neighbor

gene id symbol gene type direction distance location
bub1bb LOC106582108 coding upstream 28418 45427075 ~ 45430207 (+)
zgc:162989 pp14b coding upstream 36711 45404636 ~ 45421914 (+)
LOC110497977 LOC106582390 coding upstream 157201 45298446 ~ 45301424 (+)
LOC110497973 LOC106583826 coding upstream 162250 45291705 ~ 45296375 (+)
LOC110497972 LOC106582486 coding upstream 166967 45266098 ~ 45291658 (+)
si:dkey-248g15.3 NA coding downstream 174777 45633634 ~ 45635163 (+)
LOC110497986 LOC106581668 coding downstream 204285 45663142 ~ 45672367 (+)
LOC110497988 LOC106581430 coding downstream 226001 45684858 ~ 45720183 (+)
LOC110497992 LOC106581094 coding downstream 335033 45793890 ~ 45798812 (+)
LOC110497991 LOC106580844 coding downstream 357116 45815973 ~ 45862580 (+)
G1629158 NA non-coding upstream 9185 45449226 ~ 45449440 (+)
G1629155 NA non-coding upstream 12567 45445828 ~ 45446058 (+)
G1629152 NA non-coding upstream 16164 45441542 ~ 45442461 (+)
G1629120 NA non-coding upstream 74806 45383524 ~ 45383819 (+)
G1629117 NA non-coding upstream 77085 45381310 ~ 45381540 (+)
G1629167 NA non-coding downstream 243 45459100 ~ 45459315 (+)
G1629170 NA non-coding downstream 2972 45461829 ~ 45462057 (+)
G1629173 NA non-coding downstream 5236 45464093 ~ 45464303 (+)
G1629174 NA non-coding downstream 6950 45465807 ~ 45466061 (+)
G1629175 NA non-coding downstream 9103 45467960 ~ 45468214 (+)
G1629134 spit1 other upstream 58803 45396831 ~ 45399822 (+)
G1628865 LOC105030512 other upstream 264384 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 405074 45051160 ~ 45053552 (+)
G1628689 NA other upstream 571452 44886871 ~ 44887173 (+)
G1629200 NA other downstream 42937 45501794 ~ 45502263 (+)
G1629210 NA other downstream 57317 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 554867 46013724 ~ 46016639 (+)
G1629912 NA other downstream 766525 46225382 ~ 46225820 (+)
LOC110498004 LOC106580093 other downstream 799062 46257919 ~ 46318609 (+)

Expression


Co-expression Network