G1629173


Basic Information

Item Value
gene id G1629173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45464093 ~ 45464303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864122
cccagatccctttCATTTGCTTGAAGAAAAGATGCAGGAAAAGGGGCCGCAGATCGGGCATCCTTCTGAGAATCcataggcgagcgagtaaactcccactactatccattcttcttgctaacgtgcagtcattggaaaataaaattgacgagacattaaaaactgtaatatcttctGTGTCACCGagatgtggctgaacgacgatacGAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864122 True 211 lncRNA 0.44 1 45464093 45464303

Neighbor

gene id symbol gene type direction distance location
bub1bb LOC106582108 coding upstream 33886 45427075 ~ 45430207 (+)
zgc:162989 pp14b coding upstream 42179 45404636 ~ 45421914 (+)
LOC110497977 LOC106582390 coding upstream 162669 45298446 ~ 45301424 (+)
LOC110497973 LOC106583826 coding upstream 167718 45291705 ~ 45296375 (+)
LOC110497972 LOC106582486 coding upstream 172435 45266098 ~ 45291658 (+)
si:dkey-248g15.3 NA coding downstream 169331 45633634 ~ 45635163 (+)
LOC110497986 LOC106581668 coding downstream 198839 45663142 ~ 45672367 (+)
LOC110497988 LOC106581430 coding downstream 220555 45684858 ~ 45720183 (+)
LOC110497992 LOC106581094 coding downstream 329587 45793890 ~ 45798812 (+)
LOC110497991 LOC106580844 coding downstream 351670 45815973 ~ 45862580 (+)
G1629170 NA non-coding upstream 2036 45461829 ~ 45462057 (+)
G1629167 NA non-coding upstream 4778 45459100 ~ 45459315 (+)
G1629166 NA non-coding upstream 5236 45458625 ~ 45458857 (+)
G1629158 NA non-coding upstream 14653 45449226 ~ 45449440 (+)
G1629155 NA non-coding upstream 18035 45445828 ~ 45446058 (+)
G1629174 NA non-coding downstream 1504 45465807 ~ 45466061 (+)
G1629175 NA non-coding downstream 3657 45467960 ~ 45468214 (+)
LOC110497981 LOC106581963 non-coding downstream 5350 45444826 ~ 45470840 (+)
G1629181 NA non-coding downstream 13105 45477408 ~ 45477781 (+)
G1629182 NA non-coding downstream 14202 45478505 ~ 45478812 (+)
G1629134 spit1 other upstream 64271 45396831 ~ 45399822 (+)
G1628865 LOC105030512 other upstream 269852 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 410542 45051160 ~ 45053552 (+)
G1628689 NA other upstream 576920 44886871 ~ 44887173 (+)
G1629200 NA other downstream 37491 45501794 ~ 45502263 (+)
G1629210 NA other downstream 51871 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 549421 46013724 ~ 46016639 (+)
G1629912 NA other downstream 761079 46225382 ~ 46225820 (+)
LOC110498004 LOC106580093 other downstream 793616 46257919 ~ 46318609 (+)

Expression


Co-expression Network