XLOC_003548 (wdr83os)


Basic Information

Item Value
gene id XLOC_003548
gene name wdr83os
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 30744266 ~ 30747836 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006944
ATGACATTATTAATACACAGTCGTCGTTTATACTCAAAGACTCCTCATCGACAGGGGACGCTAAGAATCCACACATCTTTGAACGCAGCGGAATTGAGCGTAGTAGAGTTTTACATGTCAGCTGTTGGCTGACGTGCTGCTCCTAAGCCTctcaaattagttttaaaattgataagttttaaaaaaatatgaccGTGAACAACATGGCAGATCCAAGACGACAGAATAAGATTTTTCGCTACAAGCCTCCCAACACCGAATCAAACCCCACACTGGAAGATCCTACACCAGATTACATGAACCTGCTCGGCATGATCTTCAGTATGTGTGGTCTGATGCTCAAGCTTAAATGGTGTGCGTGGATTGCAGTTTATTGCTCATTCATCAGTTTTGCCAATTCACGAAGCTCTGAAGACACTAAACAGATGATGAGCAGCTTCATGCTGTCCATTTCGGCGGTCGTGATGTCTTATTTGCAGAACCCACAGCCCATGTCACCACCGTGGTAACAAATAATCCAGAACGCAGTCAGCATCTCAGCAGGAACGGTATGAGAACCAGCTGATCCTCCCACTGTCCTTCTGGGACGCATGGACTACACTCATCAGCCCAGCTGGCCAATCAGAAGCTGACAAAATGACCGTTGGAGCTCCTGTTTGGCCATTTCAAGTTTTCTTCTGTGTATACCAGTTATTATATGTATGTAAATGACCACACCATGCTAAAATATTCATATCCTGTGAAAAattttgagaaataaatgacCGTTTTTATGCACTGCTTCAAA
>TCONS_00006945
TGGCTGACGTGCTGCTCCTAAGCCTctcaaattagttttaaaattgataagttttaaaaaaatatgaccGTGAACAACATGGCAGATCCAAGACGACAGAATAAGATTTTTCGCTACAAGCCTCCCAACACCGAATCAAACCCCACACTGGAAGATCCTACACCAGATTACATGAACCTGCTCGGCATGATCTTCAGTATGTGTGGTCTGATGCTCAAGCTTAAATGGTGTGCGTGGATTGCAGTTTATTGCTCATTCATCAGTTTTGCCAATTCACGAAGCTCTGAAGACACTAAACAGATGATGAGCAGCTTCATaagacagaaactgaAATAGGTTTAGaaaaagtgaaggGCTGTCCATTTCGGCGGTCGTGATGTCTTATTTGCAGAACCCACAGCCCATGTCACCACCGTGGTAACAAATAATCCAGAACGCAGTCAGCATCTCAGCAGGAACGGTATGAGAACCAGCTGATCCTCCCACTGTCCTTCTGGGACGCATGGACTACACTCATCAGCCCAGCTGGCCAATCAGAAGCTGACAAAATGACCGTTGGAGCTCCTGTTTGGCCATTTCAAGTTTTCTTCTGTGTATACCAGTTATTATATGTATGTAAATGACCACACCATGCTAAAATATTCATATCCTGTGAAAAattttgagaaataaatgacCGTTTTTATGCA

Function

symbol description
wdr83os Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human WDR83OS (WD repeat domain 83 opposite strand).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko03110 Chaperones and folding catalysts

ZFIN:

id description
ZDB-GENE-040426-1674 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human WDR83OS (WD repeat domain 83 opposite strand).

Ensembl:

ensembl_id ENSDARG00000025554

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006944 False 787 mRNA 0.43 4 30744266 30747836
TCONS_00006945 True 689 mRNA 0.43 5 30744391 30747826

Neighbor

gene id symbol gene type direction distance location
XLOC_003547 slc22a7a coding upstream 1300 30729745 ~ 30742966 (+)
XLOC_003546 ttbk1a coding upstream 16025 30663300 ~ 30728241 (+)
XLOC_003545 tpcn3 coding upstream 82512 30647545 ~ 30661754 (+)
XLOC_003544 pgap4 coding upstream 101620 30636351 ~ 30642646 (+)
XLOC_003543 CR556713.1 coding upstream 108120 30614485 ~ 30636146 (+)
XLOC_003549 cacna1ab coding downstream 70107 30817943 ~ 31026335 (+)
XLOC_003550 CR855274.1 coding downstream 226935 30974771 ~ 30974892 (+)
XLOC_003551 CR855274.2 coding downstream 300018 31047854 ~ 31055288 (+)
XLOC_003552 stx10 coding downstream 373504 31121340 ~ 31133573 (+)
XLOC_003553 stx10 coding downstream 442319 31190155 ~ 31202851 (+)
XLOC_003369 CR854846.2 misc upstream 14621184 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 18032270 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 18050003 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 18058667 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 18064238 12679732 ~ 12680028 (+)
XLOC_003541 NA non-coding upstream 444212 30298703 ~ 30300054 (+)
XLOC_003537 NA non-coding upstream 490709 30252940 ~ 30253557 (+)
XLOC_003534 NA non-coding upstream 640306 30091155 ~ 30103960 (+)
XLOC_003530 NA non-coding upstream 837437 29905248 ~ 29906829 (+)
XLOC_003524 NA non-coding upstream 1153070 29590873 ~ 29591196 (+)
XLOC_003554 NA non-coding downstream 457150 31204986 ~ 31212769 (+)
XLOC_003555 NA non-coding downstream 457647 31205483 ~ 31209887 (+)
XLOC_003557 NA non-coding downstream 537148 31284984 ~ 31320539 (+)

Expression


Co-expression Network