G1629181


Basic Information

Item Value
gene id G1629181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45477408 ~ 45477781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864130
gttgtgtgtagattgatgagggcaaaaatatatttgatccattttagaataaggcagtaacgtaagaaaatgtggaaaaagtcaaggggcctgaatactttccgaatgcactgtatatgttattataaactgggtggttcaagccttgaatgctgattgactTACAGccgtatatcagactgtataccaggggtatgacaaaacatttatttttcctgctctaattacgttggtaaccagtttataatagcaataaggcacctcggggggttTTGACATATGTCCAATATACTACGACTAagagctgtatccaggcactccgtgttgcgtcgtatgtaagaacagcccttagccatggtatattggctatatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864130 True 374 lncRNA 0.39 1 45477408 45477781

Neighbor

gene id symbol gene type direction distance location
LOC110497981 LOC106581963 coding upstream 6568 45444826 ~ 45470840 (+)
bub1bb LOC106582108 coding upstream 47201 45427075 ~ 45430207 (+)
zgc:162989 pp14b coding upstream 55494 45404636 ~ 45421914 (+)
LOC110497977 LOC106582390 coding upstream 175984 45298446 ~ 45301424 (+)
LOC110497973 LOC106583826 coding upstream 181033 45291705 ~ 45296375 (+)
si:dkey-248g15.3 NA coding downstream 155853 45633634 ~ 45635163 (+)
LOC110497986 LOC106581668 coding downstream 185361 45663142 ~ 45672367 (+)
LOC110497988 LOC106581430 coding downstream 207077 45684858 ~ 45720183 (+)
LOC110497992 LOC106581094 coding downstream 316109 45793890 ~ 45798812 (+)
LOC110497991 LOC106580844 coding downstream 338192 45815973 ~ 45862580 (+)
G1629175 NA non-coding upstream 9194 45467960 ~ 45468214 (+)
G1629174 NA non-coding upstream 11347 45465807 ~ 45466061 (+)
G1629173 NA non-coding upstream 13105 45464093 ~ 45464303 (+)
G1629170 NA non-coding upstream 15351 45461829 ~ 45462057 (+)
G1629182 NA non-coding downstream 724 45478505 ~ 45478812 (+)
G1629183 NA non-coding downstream 1361 45479142 ~ 45479452 (+)
G1629193 NA non-coding downstream 14793 45492574 ~ 45492839 (+)
G1629204 NA non-coding downstream 28400 45506181 ~ 45506583 (+)
G1629211 NA non-coding downstream 40985 45518766 ~ 45519634 (+)
G1629134 spit1 other upstream 77586 45396831 ~ 45399822 (+)
G1628865 LOC105030512 other upstream 283167 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 423857 45051160 ~ 45053552 (+)
G1628689 NA other upstream 590235 44886871 ~ 44887173 (+)
G1629200 NA other downstream 24013 45501794 ~ 45502263 (+)
G1629210 NA other downstream 38393 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 535943 46013724 ~ 46016639 (+)
G1629912 NA other downstream 747601 46225382 ~ 46225820 (+)
LOC110498004 LOC106580093 other downstream 780138 46257919 ~ 46318609 (+)

Expression


Co-expression Network