G1629183


Basic Information

Item Value
gene id G1629183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45479142 ~ 45479452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864132
gtgtataaaatcgggcACACAGCcaggcaatctccatagacaaacagtggcagtagattagccttactgaagagctcaaccTTCAACGTGGCACaatcataagatgccaccttttcaacaagtcagttcgtcaaatgtctgccctgctagagctgcccatgccaactgtaagtgctgttattgtgaagtggaaacatctaggagcaacaacggcttagtcgtgaagtggtagaccacacaagctcacagaacgggattgCCGAGTACTGAAGCGCGTAGCACgtgtcctcgattgcaacactattgagttc

Function

NR:

description
PREDICTED: protein RCC2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864132 True 311 lncRNA 0.48 1 45479142 45479452

Neighbor

gene id symbol gene type direction distance location
LOC110497981 LOC106581963 coding upstream 8302 45444826 ~ 45470840 (+)
bub1bb LOC106582108 coding upstream 48935 45427075 ~ 45430207 (+)
zgc:162989 pp14b coding upstream 57228 45404636 ~ 45421914 (+)
LOC110497977 LOC106582390 coding upstream 177718 45298446 ~ 45301424 (+)
LOC110497973 LOC106583826 coding upstream 182767 45291705 ~ 45296375 (+)
si:dkey-248g15.3 NA coding downstream 154182 45633634 ~ 45635163 (+)
LOC110497986 LOC106581668 coding downstream 183690 45663142 ~ 45672367 (+)
LOC110497988 LOC106581430 coding downstream 205406 45684858 ~ 45720183 (+)
LOC110497992 LOC106581094 coding downstream 314438 45793890 ~ 45798812 (+)
LOC110497991 LOC106580844 coding downstream 336521 45815973 ~ 45862580 (+)
G1629182 NA non-coding upstream 330 45478505 ~ 45478812 (+)
G1629181 NA non-coding upstream 1361 45477408 ~ 45477781 (+)
G1629175 NA non-coding upstream 10928 45467960 ~ 45468214 (+)
G1629174 NA non-coding upstream 13081 45465807 ~ 45466061 (+)
G1629193 NA non-coding downstream 13122 45492574 ~ 45492839 (+)
G1629204 NA non-coding downstream 26729 45506181 ~ 45506583 (+)
G1629211 NA non-coding downstream 39314 45518766 ~ 45519634 (+)
G1629213 NA non-coding downstream 44585 45524037 ~ 45570115 (+)
G1629317 LOC106581578 non-coding downstream 161718 45641170 ~ 45678744 (+)
G1629134 spit1 other upstream 79320 45396831 ~ 45399822 (+)
G1628865 LOC105030512 other upstream 284901 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 425591 45051160 ~ 45053552 (+)
G1628689 NA other upstream 591969 44886871 ~ 44887173 (+)
G1629200 NA other downstream 22342 45501794 ~ 45502263 (+)
G1629210 NA other downstream 36722 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 534272 46013724 ~ 46016639 (+)
G1629912 NA other downstream 745930 46225382 ~ 46225820 (+)
LOC110498004 LOC106580093 other downstream 778467 46257919 ~ 46318609 (+)

Expression


Co-expression Network