G1629211


Basic Information

Item Value
gene id G1629211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45518766 ~ 45519634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864160
gtactgtcacgttctgaccatcgtttgtgtgtgtttttcttgttttagtgttggtcaggacgtgaactgggtgggcattctatgttggatgtcttgtttgtctatttctatgtctggcctgatatggttctcaatcagaggcaggtgttagtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgttggtgggtgattgttcctgtctatgtgtttttcaccagataggctgttttaggttttcgttacgttcatcacgttctttattttgtagtgtttgcattgattcgtgttttacgtttgttcattaaaacatggatcgcaatctacacgctgcattttggtccgactctccttctcataaagaaaaccgttacatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctttgatcagtctcctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatatttaaagcttgggaaatatttttgtatccaaatccagctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatactgagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864160 True 869 lncRNA 0.42 1 45518766 45519634

Neighbor

gene id symbol gene type direction distance location
LOC110497981 LOC106581963 coding upstream 47926 45444826 ~ 45470840 (+)
bub1bb LOC106582108 coding upstream 88559 45427075 ~ 45430207 (+)
zgc:162989 pp14b coding upstream 96852 45404636 ~ 45421914 (+)
LOC110497977 LOC106582390 coding upstream 217342 45298446 ~ 45301424 (+)
LOC110497973 LOC106583826 coding upstream 222391 45291705 ~ 45296375 (+)
si:dkey-248g15.3 NA coding downstream 114000 45633634 ~ 45635163 (+)
LOC110497986 LOC106581668 coding downstream 143508 45663142 ~ 45672367 (+)
LOC110497988 LOC106581430 coding downstream 165224 45684858 ~ 45720183 (+)
LOC110497992 LOC106581094 coding downstream 274256 45793890 ~ 45798812 (+)
LOC110497991 LOC106580844 coding downstream 296339 45815973 ~ 45862580 (+)
G1629204 NA non-coding upstream 12183 45506181 ~ 45506583 (+)
G1629193 NA non-coding upstream 25927 45492574 ~ 45492839 (+)
G1629183 NA non-coding upstream 39314 45479142 ~ 45479452 (+)
G1629182 NA non-coding upstream 39954 45478505 ~ 45478812 (+)
G1629181 NA non-coding upstream 40985 45477408 ~ 45477781 (+)
G1629213 NA non-coding downstream 4403 45524037 ~ 45570115 (+)
G1629317 LOC106581578 non-coding downstream 121536 45641170 ~ 45678744 (+)
G1629320 mthfd1 non-coding downstream 123383 45643017 ~ 45650419 (+)
G1629336 LOC106581578 non-coding downstream 161366 45681000 ~ 45681254 (+)
G1629306 NA non-coding downstream 201467 45721101 ~ 45722154 (+)
G1629210 NA other upstream 2118 45516174 ~ 45516648 (+)
G1629200 NA other upstream 16503 45501794 ~ 45502263 (+)
G1629134 spit1 other upstream 118944 45396831 ~ 45399822 (+)
G1628865 LOC105030512 other upstream 324525 45186962 ~ 45194241 (+)
G1629779 LOC106580335 other downstream 494090 46013724 ~ 46016639 (+)
G1629912 NA other downstream 705748 46225382 ~ 46225820 (+)
LOC110498004 LOC106580093 other downstream 738285 46257919 ~ 46318609 (+)
G1631702 NA other downstream 2140492 47660126 ~ 47661235 (+)
G1631844 NA other downstream 2228063 47747697 ~ 47749082 (+)

Expression


Co-expression Network