G1629306


Basic Information

Item Value
gene id G1629306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45721101 ~ 45722154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864262
tttatttgcaaatgatggtggaaaataagtatttggtcaataacaaaagtttatctcaatactttgttatataccctttgttggcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgttggtattttggcccattcctccatgcggatctcctctagagcagtgacgttttggggctgttgctgggcagcacagactttcaactgcctccaaagattttctacgtGGTTGagttctggagactggctaggccactccaggaccttgaaatgattcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatgctcttgctaatggaaggaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacacggatccgtcgtcctggtccctttgcagaaaaacagccccaaatcatgttgtttccacccccatgattcacagtaggtatggtgctctttgaatgcaactcagcattctttgtcctccaaacacaacaagttgagtttttaccaaaaagttatattttggtttcattctcccaatcttcttctggatcatccaaatgctctctagcaaacttcagacggacctggacatgtacttgcttaagcagggggacacgtctggcactgcaggatttgagtccctggcggcgtcgtgtgttactgatggtaggctttgttactttggtctcagctctctgcaggtcattcactaggtccccccgtgtggttctgtgatttttgctcaccgttgtgatcattttgaccccacagggttagatcttgcgtggagccccagatcgagggagattatcaatggtcttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcaaattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864262 True 1054 lncRNA 0.45 1 45721101 45722154

Neighbor

gene id symbol gene type direction distance location
LOC110497988 LOC106581430 coding upstream 918 45684858 ~ 45720183 (+)
LOC110497986 LOC106581668 coding upstream 48734 45663142 ~ 45672367 (+)
si:dkey-248g15.3 NA coding upstream 85938 45633634 ~ 45635163 (+)
LOC110497981 LOC106581963 coding upstream 250261 45444826 ~ 45470840 (+)
bub1bb LOC106582108 coding upstream 290894 45427075 ~ 45430207 (+)
LOC110497992 LOC106581094 coding downstream 71736 45793890 ~ 45798812 (+)
LOC110497991 LOC106580844 coding downstream 93819 45815973 ~ 45862580 (+)
LOC110497996 LOC106580630 coding downstream 192649 45914803 ~ 45918675 (+)
LOC110497997 LOC106580683 coding downstream 207172 45929326 ~ 45960769 (+)
LOC110497998 NA coding downstream 248506 45970660 ~ 45984089 (+)
G1629336 LOC106581578 non-coding upstream 39847 45681000 ~ 45681254 (+)
G1629317 LOC106581578 non-coding upstream 42357 45641170 ~ 45678744 (+)
G1629320 mthfd1 non-coding upstream 70682 45643017 ~ 45650419 (+)
G1629213 NA non-coding upstream 150986 45524037 ~ 45570115 (+)
G1629211 NA non-coding upstream 201467 45518766 ~ 45519634 (+)
G1629305 NA non-coding downstream 322 45722476 ~ 45722759 (+)
G1629303 LOC106581236 non-coding downstream 49235 45771389 ~ 45773995 (+)
G1629373 NA non-coding downstream 51923 45774077 ~ 45774279 (+)
G1629659 NA non-coding downstream 59361 45781515 ~ 45781926 (+)
G1629667 NA non-coding downstream 65148 45787302 ~ 45787593 (+)
G1629210 NA other upstream 204453 45516174 ~ 45516648 (+)
G1629200 NA other upstream 218838 45501794 ~ 45502263 (+)
G1629134 spit1 other upstream 321279 45396831 ~ 45399822 (+)
LOC110497977 LOC106582390 other upstream 419774 45298446 ~ 45301424 (+)
G1628865 LOC105030512 other upstream 526860 45186962 ~ 45194241 (+)
G1629779 LOC106580335 other downstream 291570 46013724 ~ 46016639 (+)
G1629912 NA other downstream 503228 46225382 ~ 46225820 (+)
LOC110498004 LOC106580093 other downstream 535765 46257919 ~ 46318609 (+)
G1631702 NA other downstream 1937972 47660126 ~ 47661235 (+)
G1631844 NA other downstream 2025543 47747697 ~ 47749082 (+)

Expression


Co-expression Network