Gene
RNA
| Item | Value |
|---|---|
| gene id | G1629303 |
| gene name | LOC106581236 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 45771389 ~ 45773995 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| KH domain-containing, RNA-binding, signal transduction-associated protein 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1864259 | True | 550 | lncRNA | 0.42 | 2 | 45771389 | 45773995 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497988 | LOC106581430 | coding | upstream | 51206 | 45684858 ~ 45720183 (+) |
| LOC110497986 | LOC106581668 | coding | upstream | 99022 | 45663142 ~ 45672367 (+) |
| si:dkey-248g15.3 | NA | coding | upstream | 136226 | 45633634 ~ 45635163 (+) |
| LOC110497981 | LOC106581963 | coding | upstream | 300549 | 45444826 ~ 45470840 (+) |
| bub1bb | LOC106582108 | coding | upstream | 341182 | 45427075 ~ 45430207 (+) |
| LOC110497992 | LOC106581094 | coding | downstream | 19895 | 45793890 ~ 45798812 (+) |
| LOC110497991 | LOC106580844 | coding | downstream | 41978 | 45815973 ~ 45862580 (+) |
| LOC110497996 | LOC106580630 | coding | downstream | 140808 | 45914803 ~ 45918675 (+) |
| LOC110497997 | LOC106580683 | coding | downstream | 155331 | 45929326 ~ 45960769 (+) |
| LOC110497998 | NA | coding | downstream | 196665 | 45970660 ~ 45984089 (+) |
| G1629305 | NA | non-coding | upstream | 48630 | 45722476 ~ 45722759 (+) |
| G1629306 | NA | non-coding | upstream | 49235 | 45721101 ~ 45722154 (+) |
| G1629336 | LOC106581578 | non-coding | upstream | 90135 | 45681000 ~ 45681254 (+) |
| G1629317 | LOC106581578 | non-coding | upstream | 92645 | 45641170 ~ 45678744 (+) |
| G1629320 | mthfd1 | non-coding | upstream | 120970 | 45643017 ~ 45650419 (+) |
| G1629373 | NA | non-coding | downstream | 82 | 45774077 ~ 45774279 (+) |
| G1629659 | NA | non-coding | downstream | 7520 | 45781515 ~ 45781926 (+) |
| G1629667 | NA | non-coding | downstream | 13307 | 45787302 ~ 45787593 (+) |
| G1629669 | NA | non-coding | downstream | 17609 | 45791604 ~ 45792099 (+) |
| G1629677 | NA | non-coding | downstream | 30625 | 45804620 ~ 45804911 (+) |
| G1629210 | NA | other | upstream | 254741 | 45516174 ~ 45516648 (+) |
| G1629200 | NA | other | upstream | 269126 | 45501794 ~ 45502263 (+) |
| G1629134 | spit1 | other | upstream | 371567 | 45396831 ~ 45399822 (+) |
| LOC110497977 | LOC106582390 | other | upstream | 470062 | 45298446 ~ 45301424 (+) |
| G1628865 | LOC105030512 | other | upstream | 577148 | 45186962 ~ 45194241 (+) |
| G1629779 | LOC106580335 | other | downstream | 239729 | 46013724 ~ 46016639 (+) |
| G1629912 | NA | other | downstream | 451387 | 46225382 ~ 46225820 (+) |
| LOC110498004 | LOC106580093 | other | downstream | 483924 | 46257919 ~ 46318609 (+) |
| G1631702 | NA | other | downstream | 1886131 | 47660126 ~ 47661235 (+) |
| G1631844 | NA | other | downstream | 1973702 | 47747697 ~ 47749082 (+) |
