Gene
RNA
| Item | Value |
|---|---|
| gene id | G1629752 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 45954774 ~ 45955080 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1864759 | True | 307 | lncRNA | 0.37 | 1 | 45954774 | 45955080 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497996 | LOC106580630 | coding | upstream | 36099 | 45914803 ~ 45918675 (+) |
| LOC110497991 | LOC106580844 | coding | upstream | 92194 | 45815973 ~ 45862580 (+) |
| LOC110497992 | LOC106581094 | coding | upstream | 155962 | 45793890 ~ 45798812 (+) |
| LOC110497988 | LOC106581430 | coding | upstream | 234591 | 45684858 ~ 45720183 (+) |
| LOC110497986 | LOC106581668 | coding | upstream | 282407 | 45663142 ~ 45672367 (+) |
| LOC110497998 | NA | coding | downstream | 15580 | 45970660 ~ 45984089 (+) |
| LOC110498004 | LOC106580093 | coding | downstream | 304548 | 46257919 ~ 46318609 (+) |
| rhd | LOC100136695 | coding | downstream | 503193 | 46458273 ~ 46461750 (+) |
| LOC110498012 | LOC106579491 | coding | downstream | 680877 | 46635957 ~ 46718661 (+) |
| fam167b | LOC106610812 | coding | downstream | 864041 | 46819121 ~ 46824076 (+) |
| G1629750 | NA | non-coding | upstream | 1396 | 45953142 ~ 45953378 (+) |
| G1629749 | NA | non-coding | upstream | 1979 | 45952529 ~ 45952795 (+) |
| G1629690 | NA | non-coding | upstream | 142261 | 45812314 ~ 45812513 (+) |
| G1629677 | NA | non-coding | upstream | 149863 | 45804620 ~ 45804911 (+) |
| G1629753 | NA | non-coding | downstream | 805 | 45955885 ~ 45956110 (+) |
| LOC110497997 | LOC106580683 | non-coding | downstream | 3476 | 45929326 ~ 45960769 (+) |
| G1629734 | NA | non-coding | downstream | 7528 | 45962608 ~ 45963149 (+) |
| G1629761 | NA | non-coding | downstream | 30828 | 45985908 ~ 45986134 (+) |
| G1629767 | NA | non-coding | downstream | 35685 | 45990765 ~ 45991084 (+) |
| G1629210 | NA | other | upstream | 438126 | 45516174 ~ 45516648 (+) |
| G1629200 | NA | other | upstream | 452511 | 45501794 ~ 45502263 (+) |
| G1629134 | spit1 | other | upstream | 554952 | 45396831 ~ 45399822 (+) |
| LOC110497977 | LOC106582390 | other | upstream | 653447 | 45298446 ~ 45301424 (+) |
| G1628865 | LOC105030512 | other | upstream | 760533 | 45186962 ~ 45194241 (+) |
| G1629779 | LOC106580335 | other | downstream | 58644 | 46013724 ~ 46016639 (+) |
| G1629912 | NA | other | downstream | 270302 | 46225382 ~ 46225820 (+) |
| G1631702 | NA | other | downstream | 1705046 | 47660126 ~ 47661235 (+) |
| G1631844 | NA | other | downstream | 1792617 | 47747697 ~ 47749082 (+) |
