G1629734


Basic Information

Item Value
gene id G1629734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45962608 ~ 45963149 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864737
gaagaggcgctgctgcgccttcttcacgatgctgtctgtgtgggtggaccaattcagtttgtctgtgatgtgtacgccgaggaacttaaaacttactaccctctccactactgttccatcgatgtacattcatgtacatactacctcaattgggccgaccaaccagtactcccgcacattggctaaccgggctatctgcattgtgtcccaccacccaccaacccctcttttacgctactgctcctctctgttcatcatgtATGTAaaatcactttaaccatatctacatgtacatactacctcaatcagcctaacTAATCgttgtctgtatgtagcctcgctacttctatagcctcgctactgtatatagcctgttttttttactgttgttttatttctttacctaccctgttcacctaatactttttttgcactgttgtttagagcctgtaaataagcatttcactgtaagatctacacatgttgtattcagcacacgtGACAAAAAAACTTTGATTTGACAATCCTCAAACAAAATGGAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864737 True 542 lncRNA 0.42 1 45962608 45963149

Neighbor

gene id symbol gene type direction distance location
LOC110497997 LOC106580683 coding upstream 2283 45929326 ~ 45960769 (+)
LOC110497996 LOC106580630 coding upstream 43933 45914803 ~ 45918675 (+)
LOC110497991 LOC106580844 coding upstream 100028 45815973 ~ 45862580 (+)
LOC110497992 LOC106581094 coding upstream 163796 45793890 ~ 45798812 (+)
LOC110497988 LOC106581430 coding upstream 242425 45684858 ~ 45720183 (+)
LOC110497998 NA coding downstream 7511 45970660 ~ 45984089 (+)
LOC110498004 LOC106580093 coding downstream 296479 46257919 ~ 46318609 (+)
rhd LOC100136695 coding downstream 495124 46458273 ~ 46461750 (+)
LOC110498012 LOC106579491 coding downstream 672808 46635957 ~ 46718661 (+)
fam167b LOC106610812 coding downstream 855972 46819121 ~ 46824076 (+)
G1629753 NA non-coding upstream 6498 45955885 ~ 45956110 (+)
G1629752 NA non-coding upstream 7528 45954774 ~ 45955080 (+)
G1629750 NA non-coding upstream 9230 45953142 ~ 45953378 (+)
G1629749 NA non-coding upstream 9813 45952529 ~ 45952795 (+)
G1629761 NA non-coding downstream 22759 45985908 ~ 45986134 (+)
G1629767 NA non-coding downstream 27616 45990765 ~ 45991084 (+)
G1629769 NA non-coding downstream 32674 45995823 ~ 46009052 (+)
G1629770 NA non-coding downstream 38401 46001550 ~ 46006002 (+)
G1629775 NA non-coding downstream 47255 46010404 ~ 46010633 (+)
G1629210 NA other upstream 445960 45516174 ~ 45516648 (+)
G1629200 NA other upstream 460345 45501794 ~ 45502263 (+)
G1629134 spit1 other upstream 562786 45396831 ~ 45399822 (+)
LOC110497977 LOC106582390 other upstream 661281 45298446 ~ 45301424 (+)
G1628865 LOC105030512 other upstream 768367 45186962 ~ 45194241 (+)
G1629779 LOC106580335 other downstream 50575 46013724 ~ 46016639 (+)
G1629912 NA other downstream 262233 46225382 ~ 46225820 (+)
G1631702 NA other downstream 1696977 47660126 ~ 47661235 (+)
G1631844 NA other downstream 1784548 47747697 ~ 47749082 (+)

Expression


Co-expression Network