G1629761


Basic Information

Item Value
gene id G1629761
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45985908 ~ 45986134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864768
CCAACAGTCAGTATTGGTTACTAACAAAGGATAGGGAAGaatccctagtgggctaagccgatatgacggcttggtggacgaatggaagtgggtgtggactgagaatgAAGCGGGAAAGACAAAAGGGATCACAACACACAGTTGTTAAATATATTAATTGAAATTcgaatcctttgcacatgaacgctcactcattcgggaataattgcaatcaatatacatTTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864768 True 227 lncRNA 0.41 1 45985908 45986134

Neighbor

gene id symbol gene type direction distance location
LOC110497998 NA coding upstream 1819 45970660 ~ 45984089 (+)
LOC110497997 LOC106580683 coding upstream 25583 45929326 ~ 45960769 (+)
LOC110497996 LOC106580630 coding upstream 67233 45914803 ~ 45918675 (+)
LOC110497991 LOC106580844 coding upstream 123328 45815973 ~ 45862580 (+)
LOC110497992 LOC106581094 coding upstream 187096 45793890 ~ 45798812 (+)
LOC110498004 LOC106580093 coding downstream 273494 46257919 ~ 46318609 (+)
rhd LOC100136695 coding downstream 472139 46458273 ~ 46461750 (+)
LOC110498012 LOC106579491 coding downstream 649823 46635957 ~ 46718661 (+)
fam167b LOC106610812 coding downstream 832987 46819121 ~ 46824076 (+)
LOC100136287 LOC100136287 coding downstream 847625 46833759 ~ 46849435 (+)
G1629734 NA non-coding upstream 22759 45962608 ~ 45963149 (+)
G1629753 NA non-coding upstream 29798 45955885 ~ 45956110 (+)
G1629752 NA non-coding upstream 30828 45954774 ~ 45955080 (+)
G1629750 NA non-coding upstream 32530 45953142 ~ 45953378 (+)
G1629767 NA non-coding downstream 4631 45990765 ~ 45991084 (+)
G1629769 NA non-coding downstream 9689 45995823 ~ 46009052 (+)
G1629770 NA non-coding downstream 15416 46001550 ~ 46006002 (+)
G1629775 NA non-coding downstream 24270 46010404 ~ 46010633 (+)
G1629836 NA non-coding downstream 114647 46100781 ~ 46101023 (+)
G1629210 NA other upstream 469260 45516174 ~ 45516648 (+)
G1629200 NA other upstream 483645 45501794 ~ 45502263 (+)
G1629134 spit1 other upstream 586086 45396831 ~ 45399822 (+)
LOC110497977 LOC106582390 other upstream 684581 45298446 ~ 45301424 (+)
G1628865 LOC105030512 other upstream 791667 45186962 ~ 45194241 (+)
G1629779 LOC106580335 other downstream 27590 46013724 ~ 46016639 (+)
G1629912 NA other downstream 239248 46225382 ~ 46225820 (+)
G1631702 NA other downstream 1673992 47660126 ~ 47661235 (+)
G1631844 NA other downstream 1761563 47747697 ~ 47749082 (+)

Expression


Co-expression Network