Gene
RNA
| Item | Value |
|---|---|
| gene id | G1629839 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 46107976 ~ 46108285 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1864864 | True | 310 | lncRNA | 0.37 | 1 | 46107976 | 46108285 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497998 | NA | coding | upstream | 123887 | 45970660 ~ 45984089 (+) |
| LOC110497997 | LOC106580683 | coding | upstream | 147651 | 45929326 ~ 45960769 (+) |
| LOC110497996 | LOC106580630 | coding | upstream | 189301 | 45914803 ~ 45918675 (+) |
| LOC110497991 | LOC106580844 | coding | upstream | 245396 | 45815973 ~ 45862580 (+) |
| LOC110497992 | LOC106581094 | coding | upstream | 309164 | 45793890 ~ 45798812 (+) |
| LOC110498004 | LOC106580093 | coding | downstream | 151343 | 46257919 ~ 46318609 (+) |
| rhd | LOC100136695 | coding | downstream | 349988 | 46458273 ~ 46461750 (+) |
| LOC110498012 | LOC106579491 | coding | downstream | 527672 | 46635957 ~ 46718661 (+) |
| fam167b | LOC106610812 | coding | downstream | 710836 | 46819121 ~ 46824076 (+) |
| LOC100136287 | LOC100136287 | coding | downstream | 725474 | 46833759 ~ 46849435 (+) |
| G1629836 | NA | non-coding | upstream | 6953 | 46100781 ~ 46101023 (+) |
| G1629775 | NA | non-coding | upstream | 97343 | 46010404 ~ 46010633 (+) |
| G1629769 | NA | non-coding | upstream | 98924 | 45995823 ~ 46009052 (+) |
| G1629770 | NA | non-coding | upstream | 101974 | 46001550 ~ 46006002 (+) |
| G1629767 | NA | non-coding | upstream | 116892 | 45990765 ~ 45991084 (+) |
| G1629845 | NA | non-coding | downstream | 7923 | 46116208 ~ 46116502 (+) |
| G1629873 | NA | non-coding | downstream | 50939 | 46159224 ~ 46159484 (+) |
| G1629878 | NA | non-coding | downstream | 59086 | 46167371 ~ 46167688 (+) |
| G1629882 | NA | non-coding | downstream | 66341 | 46174626 ~ 46174832 (+) |
| G1629895 | LOC106580283 | non-coding | downstream | 91663 | 46199948 ~ 46204913 (+) |
| G1629779 | LOC106580335 | other | upstream | 91337 | 46013724 ~ 46016639 (+) |
| G1629210 | NA | other | upstream | 591328 | 45516174 ~ 45516648 (+) |
| G1629200 | NA | other | upstream | 605713 | 45501794 ~ 45502263 (+) |
| G1629134 | spit1 | other | upstream | 708154 | 45396831 ~ 45399822 (+) |
| LOC110497977 | LOC106582390 | other | upstream | 806649 | 45298446 ~ 45301424 (+) |
| G1629912 | NA | other | downstream | 117097 | 46225382 ~ 46225820 (+) |
| G1631702 | NA | other | downstream | 1551841 | 47660126 ~ 47661235 (+) |
| G1631844 | NA | other | downstream | 1639412 | 47747697 ~ 47749082 (+) |
| LOC110498044 | LOC106575475 | other | downstream | 2015663 | 48122225 ~ 48129380 (+) |
