G1629873


Basic Information

Item Value
gene id G1629873
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 46159224 ~ 46159484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864899
gttatttgaccctgctggtcatctatgaacgtttgaacctcttggccatgtactgttataatctccacccagcacagccagaagaggactgaccacccctcagagcatggttcctctctaggtttcttcctaggttcccgccattctagggagtttttcctagccacgtgcttctacatctgcattgcttgctgtttggggtgttAGACTAGGTTTCTGTAAGACACTTTGTGGcatcggctgatgtaagaagggctttat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864899 True 261 lncRNA 0.48 1 46159224 46159484

Neighbor

gene id symbol gene type direction distance location
LOC110497998 NA coding upstream 175135 45970660 ~ 45984089 (+)
LOC110497997 LOC106580683 coding upstream 198899 45929326 ~ 45960769 (+)
LOC110497996 LOC106580630 coding upstream 240549 45914803 ~ 45918675 (+)
LOC110497991 LOC106580844 coding upstream 296644 45815973 ~ 45862580 (+)
LOC110497992 LOC106581094 coding upstream 360412 45793890 ~ 45798812 (+)
LOC110498004 LOC106580093 coding downstream 100144 46257919 ~ 46318609 (+)
rhd LOC100136695 coding downstream 298789 46458273 ~ 46461750 (+)
LOC110498012 LOC106579491 coding downstream 476473 46635957 ~ 46718661 (+)
fam167b LOC106610812 coding downstream 659637 46819121 ~ 46824076 (+)
LOC100136287 LOC100136287 coding downstream 674275 46833759 ~ 46849435 (+)
G1629845 NA non-coding upstream 42722 46116208 ~ 46116502 (+)
G1629839 NA non-coding upstream 50939 46107976 ~ 46108285 (+)
G1629836 NA non-coding upstream 58201 46100781 ~ 46101023 (+)
G1629775 NA non-coding upstream 148591 46010404 ~ 46010633 (+)
G1629769 NA non-coding upstream 150172 45995823 ~ 46009052 (+)
G1629878 NA non-coding downstream 7887 46167371 ~ 46167688 (+)
G1629882 NA non-coding downstream 15142 46174626 ~ 46174832 (+)
G1629895 LOC106580283 non-coding downstream 40464 46199948 ~ 46204913 (+)
G1629900 NA non-coding downstream 49252 46208736 ~ 46209003 (+)
G1629914 NA non-coding downstream 74247 46233731 ~ 46234066 (+)
G1629779 LOC106580335 other upstream 142585 46013724 ~ 46016639 (+)
G1629210 NA other upstream 642576 45516174 ~ 45516648 (+)
G1629200 NA other upstream 656961 45501794 ~ 45502263 (+)
G1629134 spit1 other upstream 759402 45396831 ~ 45399822 (+)
LOC110497977 LOC106582390 other upstream 857897 45298446 ~ 45301424 (+)
G1629912 NA other downstream 65898 46225382 ~ 46225820 (+)
G1631702 NA other downstream 1500642 47660126 ~ 47661235 (+)
G1631844 NA other downstream 1588213 47747697 ~ 47749082 (+)
LOC110498044 LOC106575475 other downstream 1964464 48122225 ~ 48129380 (+)

Expression


Co-expression Network