G1629959


Basic Information

Item Value
gene id G1629959
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 46297018 ~ 46297566 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1864989
AAAATTAACAGATTCACATACAAGGCAGAGAGATACATGATTACTGTTAAGGTTTTCTtgtgtcgaaggagaggaggaccaaaatgcagcgtggttatctcgatacatctttaataaagaatataacgaacaatacaaaaacgtaatgtgaaaggagaaaaaaaataaaaaaaataaaaaatagccctatctggtgcaaacaaacacagagacaggaacaatcacccacgaaacactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccactccaggcaaccatagacttacctagactactctactaaacacaaccccattaatctacaaaaacccctagacaagacaaacacataaatcacccatgtcacaccctggcctgaccaaaataataaagaaaacacacaaaatactaagaccagggcgtgacaattacaGCACtgcatatagacataatatgacatttgaaatgtctttattctttgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1864989 True 527 lncRNA 0.37 2 46297018 46297566

Neighbor

gene id symbol gene type direction distance location
LOC110497998 NA coding upstream 312929 45970660 ~ 45984089 (+)
LOC110497997 LOC106580683 coding upstream 336693 45929326 ~ 45960769 (+)
LOC110497996 LOC106580630 coding upstream 378343 45914803 ~ 45918675 (+)
LOC110497991 LOC106580844 coding upstream 434438 45815973 ~ 45862580 (+)
LOC110497992 LOC106581094 coding upstream 498206 45793890 ~ 45798812 (+)
rhd LOC100136695 coding downstream 160707 46458273 ~ 46461750 (+)
LOC110498012 LOC106579491 coding downstream 338391 46635957 ~ 46718661 (+)
fam167b LOC106610812 coding downstream 521555 46819121 ~ 46824076 (+)
LOC100136287 LOC100136287 coding downstream 536193 46833759 ~ 46849435 (+)
LOC110498019 hdac1 coding downstream 552007 46849573 ~ 46858039 (+)
G1629922 NA non-coding upstream 57250 46239518 ~ 46239768 (+)
G1629919 NA non-coding upstream 60337 46236462 ~ 46236681 (+)
G1629916 NA non-coding upstream 61780 46234979 ~ 46235238 (+)
G1629915 NA non-coding upstream 62049 46234331 ~ 46234969 (+)
G1629914 NA non-coding upstream 62952 46233731 ~ 46234066 (+)
LOC110498004 LOC106580093 non-coding downstream 18158 46257919 ~ 46318609 (+)
G1629981 NA non-coding downstream 35704 46333270 ~ 46343210 (+)
G1630025 NA non-coding downstream 119183 46416749 ~ 46416977 (+)
G1630027 NA non-coding downstream 121024 46418590 ~ 46418819 (+)
G1630028 NA non-coding downstream 121360 46418926 ~ 46419186 (+)
G1629912 NA other upstream 71198 46225382 ~ 46225820 (+)
G1629779 LOC106580335 other upstream 280379 46013724 ~ 46016639 (+)
G1629210 NA other upstream 780370 45516174 ~ 45516648 (+)
G1629200 NA other upstream 794755 45501794 ~ 45502263 (+)
G1631702 NA other downstream 1362560 47660126 ~ 47661235 (+)
G1631844 NA other downstream 1450131 47747697 ~ 47749082 (+)
LOC110498044 LOC106575475 other downstream 1826382 48122225 ~ 48129380 (+)
LOC110498372 LOC106575065 other downstream 2281212 48251112 ~ 48583066 (+)
LOC110498046 LOC106574720 other downstream 2292059 48588944 ~ 48678169 (+)

Expression


Co-expression Network