Gene
RNA
| Item | Value |
|---|---|
| gene id | G1630301 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 46963349 ~ 46983339 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1865373 | True | 511 | lncRNA | 0.38 | 2 | 46963349 | 46983339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gjb3 | LOC106578429 | coding | upstream | 36704 | 46922561 ~ 46926645 (+) |
| LOC110498023 | LOC106578479 | coding | upstream | 58106 | 46901413 ~ 46905243 (+) |
| ppie | ppie | coding | upstream | 59982 | 46895875 ~ 46903367 (+) |
| pabpc4 | LOC106578531 | coding | upstream | 68315 | 46879174 ~ 46895034 (+) |
| LOC110498019 | hdac1 | coding | upstream | 105310 | 46849573 ~ 46858039 (+) |
| LOC110498029 | NA | coding | downstream | 297328 | 47280667 ~ 47338219 (+) |
| LOC110498032 | LOC106577542 | coding | downstream | 531485 | 47514824 ~ 47519654 (+) |
| LOC118941362 | LOC106568776 | coding | downstream | 781045 | 47764384 ~ 47765501 (+) |
| LOC110498042 | icef1 | coding | downstream | 878524 | 47861863 ~ 47937951 (+) |
| LOC110498039 | LOC106575636 | coding | downstream | 954806 | 47938145 ~ 47981306 (+) |
| G1630239 | LOC106578367 | non-coding | upstream | 28716 | 46932191 ~ 46934633 (+) |
| G1630245 | LOC106562530 | non-coding | upstream | 133028 | 46829978 ~ 46830321 (+) |
| G1630237 | NA | non-coding | upstream | 135057 | 46827979 ~ 46828292 (+) |
| G1630236 | NA | non-coding | upstream | 135698 | 46827439 ~ 46827651 (+) |
| G1630233 | NA | non-coding | upstream | 144930 | 46818160 ~ 46818419 (+) |
| G1630300 | NA | non-coding | downstream | 1493 | 46984832 ~ 46985582 (+) |
| G1630315 | NA | non-coding | downstream | 5972 | 46989311 ~ 46990215 (+) |
| G1630316 | NA | non-coding | downstream | 7073 | 46990412 ~ 46990816 (+) |
| G1630317 | NA | non-coding | downstream | 7548 | 46990887 ~ 46991746 (+) |
| G1630321 | NA | non-coding | downstream | 21811 | 47005150 ~ 47005351 (+) |
| LOC110498004 | LOC106580093 | other | upstream | 703701 | 46257919 ~ 46318609 (+) |
| G1629912 | NA | other | upstream | 737529 | 46225382 ~ 46225820 (+) |
| G1629779 | LOC106580335 | other | upstream | 946710 | 46013724 ~ 46016639 (+) |
| G1629210 | NA | other | upstream | 1446701 | 45516174 ~ 45516648 (+) |
| G1629200 | NA | other | upstream | 1461086 | 45501794 ~ 45502263 (+) |
| G1631702 | NA | other | downstream | 676787 | 47660126 ~ 47661235 (+) |
| G1631844 | NA | other | downstream | 764358 | 47747697 ~ 47749082 (+) |
| LOC110498044 | LOC106575475 | other | downstream | 1140609 | 48122225 ~ 48129380 (+) |
| LOC110498372 | LOC106575065 | other | downstream | 1595439 | 48251112 ~ 48583066 (+) |
| LOC110498046 | LOC106574720 | other | downstream | 1606286 | 48588944 ~ 48678169 (+) |
