Gene
RNA
| Item | Value |
|---|---|
| gene id | G1630321 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 47005150 ~ 47005351 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1865393 | True | 202 | lncRNA | 0.52 | 1 | 47005150 | 47005351 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498028 | LOC106578112 | coding | upstream | 24332 | 46978173 ~ 46980818 (+) |
| gjb3 | LOC106578429 | coding | upstream | 78505 | 46922561 ~ 46926645 (+) |
| LOC110498023 | LOC106578479 | coding | upstream | 99907 | 46901413 ~ 46905243 (+) |
| ppie | ppie | coding | upstream | 101783 | 46895875 ~ 46903367 (+) |
| pabpc4 | LOC106578531 | coding | upstream | 110116 | 46879174 ~ 46895034 (+) |
| LOC110498029 | NA | coding | downstream | 275316 | 47280667 ~ 47338219 (+) |
| LOC110498032 | LOC106577542 | coding | downstream | 509473 | 47514824 ~ 47519654 (+) |
| LOC118941362 | LOC106568776 | coding | downstream | 759033 | 47764384 ~ 47765501 (+) |
| LOC110498042 | icef1 | coding | downstream | 856512 | 47861863 ~ 47937951 (+) |
| LOC110498039 | LOC106575636 | coding | downstream | 932794 | 47938145 ~ 47981306 (+) |
| G1630317 | NA | non-coding | upstream | 13404 | 46990887 ~ 46991746 (+) |
| G1630316 | NA | non-coding | upstream | 14334 | 46990412 ~ 46990816 (+) |
| G1630315 | NA | non-coding | upstream | 14935 | 46989311 ~ 46990215 (+) |
| G1630300 | NA | non-coding | upstream | 19568 | 46984832 ~ 46985582 (+) |
| G1630301 | NA | non-coding | upstream | 21811 | 46963349 ~ 46983339 (+) |
| G1630324 | NA | non-coding | downstream | 2765 | 47008116 ~ 47008477 (+) |
| G1630328 | NA | non-coding | downstream | 7453 | 47012804 ~ 47013043 (+) |
| G1630329 | NA | non-coding | downstream | 8005 | 47013356 ~ 47013556 (+) |
| G1630331 | NA | non-coding | downstream | 9213 | 47014564 ~ 47014940 (+) |
| G1630337 | NA | non-coding | downstream | 15785 | 47021136 ~ 47021384 (+) |
| LOC110498004 | LOC106580093 | other | upstream | 745502 | 46257919 ~ 46318609 (+) |
| G1629912 | NA | other | upstream | 779330 | 46225382 ~ 46225820 (+) |
| G1629779 | LOC106580335 | other | upstream | 988511 | 46013724 ~ 46016639 (+) |
| G1629210 | NA | other | upstream | 1488502 | 45516174 ~ 45516648 (+) |
| G1629200 | NA | other | upstream | 1502887 | 45501794 ~ 45502263 (+) |
| G1631702 | NA | other | downstream | 654775 | 47660126 ~ 47661235 (+) |
| G1631844 | NA | other | downstream | 742346 | 47747697 ~ 47749082 (+) |
| LOC110498044 | LOC106575475 | other | downstream | 1118597 | 48122225 ~ 48129380 (+) |
| LOC110498372 | LOC106575065 | other | downstream | 1573427 | 48251112 ~ 48583066 (+) |
| LOC110498046 | LOC106574720 | other | downstream | 1584274 | 48588944 ~ 48678169 (+) |
