Gene
RNA
| Item | Value |
|---|---|
| gene id | G1631621 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 47522027 ~ 47522243 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1866828 | True | 217 | lncRNA | 0.39 | 1 | 47522027 | 47522243 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498031 | nx22a | coding | downstream | 74034 | 47417390 ~ 47447993 (-) |
| LOC110498030 | LOC106577595 | coding | downstream | 127821 | 47389804 ~ 47394206 (-) |
| LOC110498370 | LOC106577869 | coding | downstream | 349228 | 46982690 ~ 47172799 (-) |
| LOC110498027 | LOC106583458 | coding | downstream | 561284 | 46955412 ~ 46960743 (-) |
| gale | gale | coding | downstream | 575223 | 46941273 ~ 46946804 (-) |
| LOC110498033 | NA | coding | upstream | 184259 | 47706502 ~ 47725019 (-) |
| LOC110498035 | LOC106576115 | coding | upstream | 204770 | 47727013 ~ 47747466 (-) |
| LOC110498037 | LOC106575860 | coding | upstream | 247644 | 47769887 ~ 47839786 (-) |
| LOC110498038 | LOC106576015 | coding | upstream | 317642 | 47839885 ~ 47845749 (-) |
| LOC110498045 | LOC106575475 | coding | upstream | 589664 | 48111907 ~ 48147170 (-) |
| G1631454 | NA | non-coding | downstream | 144626 | 47352724 ~ 47377401 (-) |
| G1631345 | NA | non-coding | downstream | 208812 | 47311555 ~ 47313215 (-) |
| G1631213 | NA | non-coding | downstream | 479818 | 47041992 ~ 47042209 (-) |
| G1631206 | NA | non-coding | downstream | 516132 | 47005684 ~ 47005895 (-) |
| G1631205 | NA | non-coding | downstream | 520420 | 47001174 ~ 47001607 (-) |
| G1631628 | NA | non-coding | upstream | 14624 | 47536867 ~ 47537092 (-) |
| G1631638 | NA | non-coding | upstream | 34459 | 47556702 ~ 47556969 (-) |
| G1631721 | NA | non-coding | upstream | 105802 | 47628045 ~ 47628728 (-) |
| G1631723 | NA | non-coding | upstream | 108665 | 47630908 ~ 47631112 (-) |
| G1631724 | NA | non-coding | upstream | 109778 | 47632021 ~ 47632236 (-) |
| G1631120 | LOC106612182 | other | downstream | 691377 | 46830334 ~ 46830650 (-) |
| G1631005 | NA | other | downstream | 892521 | 46619207 ~ 46629506 (-) |
| LOC110498001 | NA | other | downstream | 1516150 | 46003765 ~ 46008718 (-) |
| G1627068 | NA | other | downstream | 4112918 | 43408727 ~ 43409109 (-) |
| G1626324 | NA | other | downstream | 4683593 | 42759294 ~ 42838434 (-) |
| G1632192 | LOC106575636 | other | upstream | 394052 | 47916295 ~ 47980466 (-) |
| G1632228 | NA | other | upstream | 446271 | 47968514 ~ 47970332 (-) |
| LOC110498375 | dlgap2 | other | upstream | 1373287 | 48812312 ~ 48896302 (-) |
| LOC110498059 | LOC106573685 | other | upstream | 1934851 | 49457082 ~ 49460760 (-) |
