G1631708


Basic Information

Item Value
gene id G1631708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47626041 ~ 47626418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1866923
aagggccagaagtatacagaatggtgtcgtctgcgtagaggtggatcagagactcaccagcagcaagagctacctcattgatgtatacagagaagagagtcggtccaagaattgaaccctgtggcacccccatagagactgccagaggtccggacagcagaccctccgatttgacacactgaactctatcagagaagtagttggtgaaccaggcgaggcaatcatttgagaaaccaaggctgtcgagtctgccgatgaggatgtggtgattgacagagtcgaaagccttggccagatcaatgaatacggctgcacagtaatgtttcttatcgatggcggttaagatataatttaggaccttgagcgtggctgaggtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1866923 True 378 lncRNA 0.50 1 47626041 47626418

Neighbor

gene id symbol gene type direction distance location
LOC110498032 LOC106577542 coding upstream 106387 47514824 ~ 47519654 (+)
LOC110498029 NA coding upstream 287822 47280667 ~ 47338219 (+)
LOC110498028 LOC106578112 coding upstream 645223 46978173 ~ 46980818 (+)
gjb3 LOC106578429 coding upstream 699396 46922561 ~ 46926645 (+)
LOC110498023 LOC106578479 coding upstream 720798 46901413 ~ 46905243 (+)
LOC118941362 LOC106568776 coding downstream 137966 47764384 ~ 47765501 (+)
LOC110498042 icef1 coding downstream 235445 47861863 ~ 47937951 (+)
LOC110498039 LOC106575636 coding downstream 311727 47938145 ~ 47981306 (+)
LOC110498040 LOC106575182 coding downstream 381676 48008094 ~ 48111647 (+)
LOC110498044 LOC106575475 coding downstream 495807 48122225 ~ 48129380 (+)
G1631706 NA non-coding upstream 773 47624994 ~ 47625268 (+)
G1631679 NA non-coding upstream 29266 47594383 ~ 47596775 (+)
G1631677 NA non-coding upstream 33565 47592276 ~ 47592476 (+)
G1631666 NA non-coding upstream 42833 47582893 ~ 47583208 (+)
G1631593 NA non-coding upstream 84180 47541612 ~ 47541861 (+)
G1631709 NA non-coding downstream 1482 47627900 ~ 47628750 (+)
G1631710 NA non-coding downstream 2941 47629359 ~ 47629606 (+)
G1631711 NA non-coding downstream 3587 47630005 ~ 47630211 (+)
G1631712 NA non-coding downstream 4268 47630686 ~ 47630915 (+)
G1631752 NA non-coding downstream 50924 47677342 ~ 47677943 (+)
LOC110498004 LOC106580093 other upstream 1366393 46257919 ~ 46318609 (+)
G1629912 NA other upstream 1400221 46225382 ~ 46225820 (+)
G1629779 LOC106580335 other upstream 1609402 46013724 ~ 46016639 (+)
G1629210 NA other upstream 2109393 45516174 ~ 45516648 (+)
G1629200 NA other upstream 2123778 45501794 ~ 45502263 (+)
G1631702 NA other downstream 33708 47660126 ~ 47661235 (+)
G1631844 NA other downstream 121279 47747697 ~ 47749082 (+)
LOC110498372 LOC106575065 other downstream 952360 48251112 ~ 48583066 (+)
LOC110498046 LOC106574720 other downstream 963207 48588944 ~ 48678169 (+)

Expression


Co-expression Network