G1631795


Basic Information

Item Value
gene id G1631795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47704511 ~ 47704767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1867013
agacatccttgatgaaaacctgctccggagcgctcaggacctcagactgggacgaaggttcaccttccaacacctTCCCTaaagcaaacagccaagacaatgcagaaagtgcttcaggacaagtctctgaatgtctttgagtggccgaGCCGAGCCCGGGCTTGaacacgatcgaacatctctggagagacctgaaaatagctgtgcatcaactctccccatccaacctgacagagcttaagaggatctgcagagaa

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1867013 True 257 lncRNA 0.51 1 47704511 47704767

Neighbor

gene id symbol gene type direction distance location
LOC110498032 LOC106577542 coding upstream 184857 47514824 ~ 47519654 (+)
LOC110498029 NA coding upstream 366292 47280667 ~ 47338219 (+)
LOC110498028 LOC106578112 coding upstream 723693 46978173 ~ 46980818 (+)
gjb3 LOC106578429 coding upstream 777866 46922561 ~ 46926645 (+)
LOC110498023 LOC106578479 coding upstream 799268 46901413 ~ 46905243 (+)
LOC118941362 LOC106568776 coding downstream 59617 47764384 ~ 47765501 (+)
LOC110498042 icef1 coding downstream 157096 47861863 ~ 47937951 (+)
LOC110498039 LOC106575636 coding downstream 233378 47938145 ~ 47981306 (+)
LOC110498040 LOC106575182 coding downstream 303327 48008094 ~ 48111647 (+)
LOC110498044 LOC106575475 coding downstream 417458 48122225 ~ 48129380 (+)
G1631787 NA non-coding upstream 4689 47699620 ~ 47699822 (+)
G1631786 NA non-coding upstream 6145 47698152 ~ 47698366 (+)
G1631785 NA non-coding upstream 6394 47697911 ~ 47698117 (+)
G1631752 NA non-coding upstream 26568 47677342 ~ 47677943 (+)
G1631712 NA non-coding upstream 73596 47630686 ~ 47630915 (+)
G1631796 NA non-coding downstream 488 47705255 ~ 47705556 (+)
G1631837 NA non-coding downstream 39507 47744274 ~ 47744519 (+)
G1631838 NA non-coding downstream 39795 47744562 ~ 47744791 (+)
G1631843 NA non-coding downstream 45117 47749884 ~ 47750571 (+)
G1631840 NA non-coding downstream 66672 47771439 ~ 47771868 (+)
G1631702 NA other upstream 43276 47660126 ~ 47661235 (+)
LOC110498004 LOC106580093 other upstream 1444863 46257919 ~ 46318609 (+)
G1629912 NA other upstream 1478691 46225382 ~ 46225820 (+)
G1629779 LOC106580335 other upstream 1687872 46013724 ~ 46016639 (+)
G1629210 NA other upstream 2187863 45516174 ~ 45516648 (+)
G1631844 NA other downstream 42930 47747697 ~ 47749082 (+)
LOC110498372 LOC106575065 other downstream 874011 48251112 ~ 48583066 (+)
LOC110498046 LOC106574720 other downstream 884858 48588944 ~ 48678169 (+)
G1632650 arhgef10 other downstream 994290 48699057 ~ 48700568 (+)

Expression


Co-expression Network