G1632075


Basic Information

Item Value
gene id G1632075
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47749760 ~ 47750706 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1867341
AAGCAAAACAGCCAGACCTTTTATTTGGTTTGAGCTTTTACGGATGCAAGAAGAgctcagatttttttaaattatgagGATTCTCAAATAGGCAACACTTCAAAATATATCTTACAGACAAAATAGAATGATGCCTTTATGAAGGAATATAGCCAGTAAACGTAAGCTTACAATCACAGTCACTTTGCTTTAGAAAAAACATGCTATAATAGACCCCatacataaaataaaaaagtacatGTACAGAACTACACACAACCTCACTATAGCAATAAGGACATCACCACGGATGGAACTGTATTAGAAATCAGTGTGTCAGGTCATGCCTTTGTAACAAGGACATCTATAACTGGTGAAGTTtttaaataaatgaacaaaacgCATAAGGCATCCGTGTCCTTGCTAGCATTAAGCTGTCATTATTTGAAGTTGAAGGATTTATGGTTCATCTTCAGTAAAAGCTGGTTTTCAAAGTTTATGGAATCTACCCTTGCTCTCCTGGGGCTGAAAACAAGTCCTGCAATGctgaacagcctttcaaagccAGTTGATGCAGGTAAGGGTGTGTTTAGCCTCAGAGACGGCTTACAGACTGCCGGGAAGGACTTGAGCAACTCCATATGATCAGTTGAACAGGCCAGGTATCCGTCCAGCTGTTTGGAGCTTTCTTGTGCTTGAGATGTCTTAATTTATTTTAGGcaaggcaagtccgttaagaacaaattcttatttacaatgacggcctacaccgaccaaaccctaacccggacaatcaatcactgccggttgtgatacagcctggaatcgaaccagggtctgtagtgacacttctagcaccgagatgcagtgccttagaccgctgcgccactcaggagagaAGAAGTCCTCATCTGATGAACTGGTGCCATCACCTAGCTGCAGCAAGGATTCTTCCAGGTGGTCCTTGA

Function

NR:

description
uncharacterized protein LOC111565833

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1867341 True 947 lncRNA 0.42 1 47749760 47750706

Neighbor

gene id symbol gene type direction distance location
LOC110498035 LOC106576115 coding downstream 2294 47727013 ~ 47747466 (-)
LOC110498033 NA coding downstream 24741 47706502 ~ 47725019 (-)
LOC110498031 nx22a coding downstream 301767 47417390 ~ 47447993 (-)
LOC110498030 LOC106577595 coding downstream 355554 47389804 ~ 47394206 (-)
LOC110498370 LOC106577869 coding downstream 576961 46982690 ~ 47172799 (-)
LOC110498037 LOC106575860 coding upstream 19181 47769887 ~ 47839786 (-)
LOC110498038 LOC106576015 coding upstream 89179 47839885 ~ 47845749 (-)
LOC110498045 LOC106575475 coding upstream 361201 48111907 ~ 48147170 (-)
LOC118941487 NA coding upstream 831395 48582101 ~ 48592024 (-)
LOC110498047 LOC106574998 coding upstream 929473 48680179 ~ 48683751 (-)
G1632083 NA non-coding downstream 13475 47735640 ~ 47736285 (-)
G1631813 NA non-coding downstream 43296 47706241 ~ 47706464 (-)
G1631794 NA non-coding downstream 45826 47703561 ~ 47703934 (-)
G1631788 NA non-coding downstream 49861 47699682 ~ 47699899 (-)
G1632099 NA non-coding upstream 28012 47778718 ~ 47849907 (-)
G1632179 icef1 non-coding upstream 148462 47899168 ~ 47901334 (-)
G1632227 NA non-coding upstream 217258 47967964 ~ 47968441 (-)
G1632192 LOC106575636 non-coding upstream 227000 47916295 ~ 47980466 (-)
G1632246 NA non-coding upstream 246516 47997222 ~ 47997438 (-)
G1631120 LOC106612182 other downstream 919110 46830334 ~ 46830650 (-)
G1631005 NA other downstream 1120254 46619207 ~ 46629506 (-)
LOC110498001 NA other downstream 1743883 46003765 ~ 46008718 (-)
G1627068 NA other downstream 4340651 43408727 ~ 43409109 (-)
G1626324 NA other downstream 4911326 42759294 ~ 42838434 (-)
G1632228 NA other upstream 217808 47968514 ~ 47970332 (-)
LOC110498375 dlgap2 other upstream 1144824 48812312 ~ 48896302 (-)
LOC110498059 LOC106573685 other upstream 1706388 49457082 ~ 49460760 (-)

Expression


Co-expression Network