G1631843


Basic Information

Item Value
gene id G1631843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47749884 ~ 47750571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1867069
actacagaccctggttcgattccaggctgtatcacaaccggcagtgattgattgtccgggttagggtttggtcggtgtaggccgtcattgtaaataagaatttgttcttaacggacttgccttgCCTAAAATAAATTAAGACATCTCAAGCACAAGAAAGCTCCAAACAGCTGGACGGATACCTGGCCTGTTCAACTGATCATATGGAGTTGCTCAAGTCCTTCCCGGCAGTCTGTAAGCCGTCTCTGAGGCTAAACACACCCTTACCTGCATCAACTggctttgaaaggctgttcagCATTGCAGGACTTGTTTTCAGCCCCAGGAGAGCAAGGGTAGATTCCATAAACTTTGAAAACCAGCTTTTACTGAAGATGAACCATAAATCCTTCAACTTCAAATAATGACAGCTTAATGCTAGCAAGGACACGGATGCCTTATGcgttttgttcatttatttaaaAACTTCACCAGTTATAGATGTCCTTGTTACAAAGGCATGACCTGACACACTGATTTCTAATACAGTTCCATCCGTGGTGATGTCCTTATTGCTATAGTGAGGTTGTGTGTAGTTCTGTACatgtacttttttattttatgtatGGGGTCTATTATAGCATGTTTTTTCTAAAGCAAAGTGACTGTGATTGTAAGCTTACGTTTACTGGCTATATTCCTTCATAAA

Function

NR:

description
uncharacterized protein LOC111565833

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1867069 True 688 lncRNA 0.41 1 47749884 47750571

Neighbor

gene id symbol gene type direction distance location
LOC110498032 LOC106577542 coding upstream 230230 47514824 ~ 47519654 (+)
LOC110498029 NA coding upstream 411665 47280667 ~ 47338219 (+)
LOC110498028 LOC106578112 coding upstream 769066 46978173 ~ 46980818 (+)
gjb3 LOC106578429 coding upstream 823239 46922561 ~ 46926645 (+)
LOC110498023 LOC106578479 coding upstream 844641 46901413 ~ 46905243 (+)
LOC118941362 LOC106568776 coding downstream 13813 47764384 ~ 47765501 (+)
LOC110498042 icef1 coding downstream 111292 47861863 ~ 47937951 (+)
LOC110498039 LOC106575636 coding downstream 187574 47938145 ~ 47981306 (+)
LOC110498040 LOC106575182 coding downstream 257523 48008094 ~ 48111647 (+)
LOC110498044 LOC106575475 coding downstream 371654 48122225 ~ 48129380 (+)
G1631838 NA non-coding upstream 5093 47744562 ~ 47744791 (+)
G1631837 NA non-coding upstream 5365 47744274 ~ 47744519 (+)
G1631796 NA non-coding upstream 44328 47705255 ~ 47705556 (+)
G1631795 NA non-coding upstream 45117 47704511 ~ 47704767 (+)
G1631787 NA non-coding upstream 50062 47699620 ~ 47699822 (+)
G1631840 NA non-coding downstream 20868 47771439 ~ 47771868 (+)
G1631857 LOC106575860 non-coding downstream 22130 47772701 ~ 47772971 (+)
G1631918 NA non-coding downstream 94490 47845061 ~ 47845732 (+)
G1631975 NA non-coding downstream 206209 47956780 ~ 47959284 (+)
G1631988 NA non-coding downstream 255154 48005725 ~ 48006042 (+)
G1631844 NA other upstream 802 47747697 ~ 47749082 (+)
G1631702 NA other upstream 88649 47660126 ~ 47661235 (+)
LOC110498004 LOC106580093 other upstream 1490236 46257919 ~ 46318609 (+)
G1629912 NA other upstream 1524064 46225382 ~ 46225820 (+)
G1629779 LOC106580335 other upstream 1733245 46013724 ~ 46016639 (+)
LOC110498372 LOC106575065 other downstream 828207 48251112 ~ 48583066 (+)
LOC110498046 LOC106574720 other downstream 839054 48588944 ~ 48678169 (+)
G1632650 arhgef10 other downstream 948486 48699057 ~ 48700568 (+)
zgc:193593 NA other downstream 1413383 49160705 ~ 49178402 (+)

Expression


Co-expression Network