G1631840


Basic Information

Item Value
gene id G1631840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47771439 ~ 47771868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1867066
AAAAAAGTCCTTCACCCAACGTTTTTGGTTACACTGCCGTGTCATAGAGTCAGACGCCTCCACAGTGCCACCTGTCTGTTCCCTGTGGCAGTGTCCAACCATAGAGTCTTGGGTCAGAATGTCTCCCTGTCACACAGCCCCTGCACATGGGTGTCTGATCCTTTCCCAACCATTTTTAAAGGGAATGCTTCCAAAGGTCCATAACCTGCAGAGGTTCCTATGGTTTTCCTCTTGACGACACCTGTAGCCTGTAACATGTCCTACAGGCCACTAGGGGTCCTCCTCCATATCGTCCAGGTTGGGTGCCATGATGAAGTGTTTTGGGTGGATCAGGCTGTGCTCGTCTGCATGCTCCTCCCAACGCCCATCATCACTCTCGTGAGTGATGTAACGCTCGCCACGCCGTGTTTCAAACTCCCTGAGGTCCAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1867066 True 430 lncRNA 0.53 1 47771439 47771868

Neighbor

gene id symbol gene type direction distance location
LOC118941362 LOC106568776 coding upstream 5938 47764384 ~ 47765501 (+)
LOC110498032 LOC106577542 coding upstream 251785 47514824 ~ 47519654 (+)
LOC110498029 NA coding upstream 433220 47280667 ~ 47338219 (+)
LOC110498028 LOC106578112 coding upstream 790621 46978173 ~ 46980818 (+)
gjb3 LOC106578429 coding upstream 844794 46922561 ~ 46926645 (+)
LOC110498042 icef1 coding downstream 89995 47861863 ~ 47937951 (+)
LOC110498039 LOC106575636 coding downstream 166277 47938145 ~ 47981306 (+)
LOC110498040 LOC106575182 coding downstream 236226 48008094 ~ 48111647 (+)
LOC110498044 LOC106575475 coding downstream 350357 48122225 ~ 48129380 (+)
LOC118941486 NA coding downstream 388885 48160753 ~ 48166744 (+)
G1631843 NA non-coding upstream 20868 47749884 ~ 47750571 (+)
G1631838 NA non-coding upstream 26648 47744562 ~ 47744791 (+)
G1631837 NA non-coding upstream 26920 47744274 ~ 47744519 (+)
G1631796 NA non-coding upstream 65883 47705255 ~ 47705556 (+)
G1631795 NA non-coding upstream 66672 47704511 ~ 47704767 (+)
G1631857 LOC106575860 non-coding downstream 833 47772701 ~ 47772971 (+)
G1631918 NA non-coding downstream 73193 47845061 ~ 47845732 (+)
G1631975 NA non-coding downstream 184912 47956780 ~ 47959284 (+)
G1631988 NA non-coding downstream 233857 48005725 ~ 48006042 (+)
G1632009 NA non-coding downstream 272635 48044503 ~ 48044810 (+)
G1631844 NA other upstream 22357 47747697 ~ 47749082 (+)
G1631702 NA other upstream 110204 47660126 ~ 47661235 (+)
LOC110498004 LOC106580093 other upstream 1511791 46257919 ~ 46318609 (+)
G1629912 NA other upstream 1545619 46225382 ~ 46225820 (+)
G1629779 LOC106580335 other upstream 1754800 46013724 ~ 46016639 (+)
LOC110498372 LOC106575065 other downstream 806910 48251112 ~ 48583066 (+)
LOC110498046 LOC106574720 other downstream 817757 48588944 ~ 48678169 (+)
G1632650 arhgef10 other downstream 927189 48699057 ~ 48700568 (+)
zgc:193593 NA other downstream 1392086 49160705 ~ 49178402 (+)

Expression


Co-expression Network