G1631857 (LOC106575860)


Basic Information

Item Value
gene id G1631857
gene name LOC106575860
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47772701 ~ 47772971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1867085
cttCTGCAGAGATCTCCTTCCATGGCTGGGGTGGGTACATGAAGGCAGCGTTCTGGATCTGATCGTTAATGTCCTCGTCCTCGTTGAAGGGGAAGGTGCCACTAAGGCTGACGTAAATGATGACCCCCACTGACCACATGTCCAAGGAGCGGTTGTAGCCCTTACTACGCAGCACCTCTGGGGCCAGGTAGGCTGGGGTACCCACCACCGAACGCCTGAACGACTTCTCACCAATGATACGGGCAAAGCCAAAGTCACACAGTTTAACCTG

Function

NR:

description
serine/threonine-protein kinase D1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1867085 True 271 lncRNA 0.55 1 47772701 47772971

Neighbor

gene id symbol gene type direction distance location
LOC118941362 LOC106568776 coding upstream 7200 47764384 ~ 47765501 (+)
LOC110498032 LOC106577542 coding upstream 253047 47514824 ~ 47519654 (+)
LOC110498029 NA coding upstream 434482 47280667 ~ 47338219 (+)
LOC110498028 LOC106578112 coding upstream 791883 46978173 ~ 46980818 (+)
gjb3 LOC106578429 coding upstream 846056 46922561 ~ 46926645 (+)
LOC110498042 icef1 coding downstream 88892 47861863 ~ 47937951 (+)
LOC110498039 LOC106575636 coding downstream 165174 47938145 ~ 47981306 (+)
LOC110498040 LOC106575182 coding downstream 235123 48008094 ~ 48111647 (+)
LOC110498044 LOC106575475 coding downstream 349254 48122225 ~ 48129380 (+)
LOC118941486 NA coding downstream 387782 48160753 ~ 48166744 (+)
G1631840 NA non-coding upstream 833 47771439 ~ 47771868 (+)
G1631843 NA non-coding upstream 22130 47749884 ~ 47750571 (+)
G1631838 NA non-coding upstream 27910 47744562 ~ 47744791 (+)
G1631837 NA non-coding upstream 28182 47744274 ~ 47744519 (+)
G1631796 NA non-coding upstream 67145 47705255 ~ 47705556 (+)
G1631918 NA non-coding downstream 72090 47845061 ~ 47845732 (+)
G1631975 NA non-coding downstream 183809 47956780 ~ 47959284 (+)
G1631988 NA non-coding downstream 232754 48005725 ~ 48006042 (+)
G1632009 NA non-coding downstream 271532 48044503 ~ 48044810 (+)
G1632035 NA non-coding downstream 325884 48098855 ~ 48171084 (+)
G1631844 NA other upstream 23619 47747697 ~ 47749082 (+)
G1631702 NA other upstream 111466 47660126 ~ 47661235 (+)
LOC110498004 LOC106580093 other upstream 1513053 46257919 ~ 46318609 (+)
G1629912 NA other upstream 1546881 46225382 ~ 46225820 (+)
G1629779 LOC106580335 other upstream 1756062 46013724 ~ 46016639 (+)
LOC110498372 LOC106575065 other downstream 805807 48251112 ~ 48583066 (+)
LOC110498046 LOC106574720 other downstream 816654 48588944 ~ 48678169 (+)
G1632650 arhgef10 other downstream 926086 48699057 ~ 48700568 (+)
zgc:193593 NA other downstream 1390983 49160705 ~ 49178402 (+)

Expression


Co-expression Network