Gene
RNA
| Item | Value |
|---|---|
| gene id | G1632227 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 47967964 ~ 47968441 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein SCAF8-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1867519 | True | 205 | lncRNA | 0.55 | 2 | 47967964 | 47968441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498038 | LOC106576015 | coding | downstream | 122215 | 47839885 ~ 47845749 (-) |
| LOC110498037 | LOC106575860 | coding | downstream | 128178 | 47769887 ~ 47839786 (-) |
| LOC110498035 | LOC106576115 | coding | downstream | 220498 | 47727013 ~ 47747466 (-) |
| LOC110498033 | NA | coding | downstream | 242945 | 47706502 ~ 47725019 (-) |
| LOC110498031 | nx22a | coding | downstream | 519971 | 47417390 ~ 47447993 (-) |
| LOC110498045 | LOC106575475 | coding | upstream | 143466 | 48111907 ~ 48147170 (-) |
| LOC118941487 | NA | coding | upstream | 613660 | 48582101 ~ 48592024 (-) |
| LOC110498047 | LOC106574998 | coding | upstream | 711738 | 48680179 ~ 48683751 (-) |
| LOC110498049 | kbtbd11 | coding | upstream | 716106 | 48684547 ~ 48696699 (-) |
| LOC110498373 | arhgef10 | coding | upstream | 730563 | 48699004 ~ 48779451 (-) |
| G1632179 | icef1 | non-coding | downstream | 66630 | 47899168 ~ 47901334 (-) |
| G1632099 | NA | non-coding | downstream | 118057 | 47778718 ~ 47849907 (-) |
| G1632075 | NA | non-coding | downstream | 217258 | 47749760 ~ 47750706 (-) |
| G1632083 | NA | non-coding | downstream | 231679 | 47735640 ~ 47736285 (-) |
| G1632192 | LOC106575636 | non-coding | upstream | 9265 | 47916295 ~ 47980466 (-) |
| G1632246 | NA | non-coding | upstream | 28781 | 47997222 ~ 47997438 (-) |
| G1632251 | NA | non-coding | upstream | 37135 | 48005576 ~ 48005843 (-) |
| G1632252 | NA | non-coding | upstream | 41283 | 48009724 ~ 48009943 (-) |
| G1632255 | NA | non-coding | upstream | 43916 | 48012357 ~ 48012629 (-) |
| G1631120 | LOC106612182 | other | downstream | 1137314 | 46830334 ~ 46830650 (-) |
| G1631005 | NA | other | downstream | 1338458 | 46619207 ~ 46629506 (-) |
| LOC110498001 | NA | other | downstream | 1962087 | 46003765 ~ 46008718 (-) |
| G1627068 | NA | other | downstream | 4558855 | 43408727 ~ 43409109 (-) |
| G1626324 | NA | other | downstream | 5129530 | 42759294 ~ 42838434 (-) |
| G1632228 | NA | other | upstream | 73 | 47968514 ~ 47970332 (-) |
| LOC110498375 | dlgap2 | other | upstream | 927089 | 48812312 ~ 48896302 (-) |
| LOC110498059 | LOC106573685 | other | upstream | 1488653 | 49457082 ~ 49460760 (-) |
| G1633961 | NA | other | upstream | 1590596 | 49559037 ~ 49560131 (-) |
