G1632415


Basic Information

Item Value
gene id G1632415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 48273397 ~ 48273644 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1867734
GCACATATTTACCATTTGCCATCAGATGATGTATTTTGCTGTCATCGTGGCTGGGCAGTTAAGAGTTAACgtgcctgctcctctcctcttgaTGACATCAGTATTGTCTTTGCATCCATGAAATGAAATGTCTAATCTTAGTCAGCAGGAGTGGGGAATTCACACACATTAATATGGAGCTcgatctcctctcccctcctctgcagtctctccctccctgttctcTTCGGTATGAAACGGTCTATGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1867734 True 248 lncRNA 0.45 1 48273397 48273644

Neighbor

gene id symbol gene type direction distance location
LOC118941486 NA coding upstream 106653 48160753 ~ 48166744 (+)
LOC110498044 LOC106575475 coding upstream 144017 48122225 ~ 48129380 (+)
LOC110498040 LOC106575182 coding upstream 161750 48008094 ~ 48111647 (+)
LOC110498039 LOC106575636 coding upstream 292091 47938145 ~ 47981306 (+)
LOC110498042 icef1 coding upstream 335446 47861863 ~ 47937951 (+)
LOC110498048 NA coding downstream 287922 48561566 ~ 48564328 (+)
LOC110498046 LOC106574720 coding downstream 315300 48588944 ~ 48678169 (+)
LOC110498051 NA coding downstream 513575 48787219 ~ 48792402 (+)
LOC110498053 erich1 coding downstream 856026 49129670 ~ 49155002 (+)
zgc:193593 NA coding downstream 887061 49160705 ~ 49178402 (+)
G1632408 NA non-coding upstream 8583 48264591 ~ 48264814 (+)
G1632405 NA non-coding upstream 12743 48260435 ~ 48260654 (+)
G1632402 NA non-coding upstream 15923 48257174 ~ 48257474 (+)
G1632373 NA non-coding upstream 38778 48234322 ~ 48234619 (+)
G1632372 NA non-coding upstream 72222 48200919 ~ 48201175 (+)
G1632429 NA non-coding downstream 26902 48300546 ~ 48300778 (+)
G1632436 NA non-coding downstream 38324 48311968 ~ 48312196 (+)
G1632437 NA non-coding downstream 38559 48312203 ~ 48312414 (+)
G1632444 NA non-coding downstream 45374 48319018 ~ 48319229 (+)
G1632445 NA non-coding downstream 45820 48319464 ~ 48319681 (+)
G1631844 NA other upstream 524315 47747697 ~ 47749082 (+)
G1631702 NA other upstream 612162 47660126 ~ 47661235 (+)
LOC110498004 LOC106580093 other upstream 2013749 46257919 ~ 46318609 (+)
G1629912 NA other upstream 2047577 46225382 ~ 46225820 (+)
LOC110498372 LOC106575065 other downstream 305134 48251112 ~ 48583066 (+)
G1632650 arhgef10 other downstream 425413 48699057 ~ 48700568 (+)
LOC110498072 NA other downstream 1890195 50163645 ~ 50168749 (+)

Expression


Co-expression Network